Gene Information

Name : RM11_0076 (RM11_0076)
Accession : YP_006664538.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : Iron transport protein yfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 102488 - 103396 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGTAAAAACTTTTTTTATCATAATTTGGGGGAGTGTTATTTTTTTGACACCCAATCTCGCTTTGTGTGCTAGCAA
ATTTAAAGCTGTTACGACTTTCACTATTATTGCTGATATGGCGCGGAATGTAGCAGGTGATGCTGCTACTGTTGAATCAA
TCACGAAACCAGGTGCTGAAATTCATGAATACCAACCCACACCTCGCGATCTTATGCGCGCGCAAGGAGCCAATCTTATC
TTGTGGAATGGGTTAGAGTTGGAGCTTTGGTTTGAGAAGTTTTTTCAAAATATCAAGAATGTTCCAAGTGTTGTTGTTTC
AAAAGGCATTGTACCGATTAAAATTGGTGAGGGGCCTTTTAGTGGTAAACCCAATCCTCATGCATGGATGTCACAGACTT
CTGCTTTGATTTACGTTGATAATATTCGTGATGCTTTTGTAAAGTACGATCCTGAGCATGCTGCTATTTATAAAGAAAAT
GCCGAAATTTATAAGCAGAAGATTCGCGCAACAATTGATCCAATTAGAGCTGAATTGGAAGCAGTACCGCAAGACAAGCG
TTGGCTTGTGACCAGTGAAGGTGCATTCAGCTATTTAGCGCGTGATTTTGATCTGAAAGAACTCTACCTATGGCCAATTA
ATGCTGATCAGCAAGGGACACCGCAGCAGGTTAAGCATGTTATTGATATGGTTCGCAAATACAATATTCAAGTAGTTTTT
TCTGAAAGCACTGTTTCCCCTGCGCCTGCTAAGCAGGTTGCGAGAGAAACCGGGGCTAAATACGGTGGTGTTCTTTATGT
TGATTCTCTGAGTGAGAAAAATGGTGAGGTGCCAACCTATATTGATTTATTACGTGTTACAAGCGGGCGTATTAGCAATG
CCTTATTAAATGGAGTAAAAGGCCAATGA

Protein sequence : 
MNVKTFFIIIWGSVIFLTPNLALCASKFKAVTTFTIIADMARNVAGDAATVESITKPGAEIHEYQPTPRDLMRAQGANLI
LWNGLELELWFEKFFQNIKNVPSVVVSKGIVPIKIGEGPFSGKPNPHAWMSQTSALIYVDNIRDAFVKYDPEHAAIYKEN
AEIYKQKIRATIDPIRAELEAVPQDKRWLVTSEGAFSYLARDFDLKELYLWPINADQQGTPQQVKHVIDMVRKYNIQVVF
SESTVSPAPAKQVARETGAKYGGVLYVDSLSEKNGEVPTYIDLLRVTSGRISNALLNGVKGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-96 69
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-96 68
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-96 68
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-96 68
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-96 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_0076 YP_006664538.1 Iron transport protein yfeA BAC0349 Protein 7e-97 68
RM11_0076 YP_006664538.1 Iron transport protein yfeA BAC0439 Protein 4e-89 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_0076 YP_006664538.1 Iron transport protein yfeA VFG0525 Protein 7e-97 68