Gene Information

Name : RM11_1165 (RM11_1165)
Accession : YP_006665578.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : TrwD protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1484253 - 1485137 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
TTGACAAGCTCTTTTTTGCAAACGCTTATCACTGCCATTATCGTTTATAACGGTATGGTTCCCAAAAGCATTAATTATGT
GCTGTTGCCTGGAGGGCAGCGCGGTACAATTGTGCAAACACCAGCTGTCATCGACGGCACACTCTCCTTTATGATTCGTA
AACACTCCCTGATGGTGAAGACGCTAGAGGAACTTAATGAAGAAGGTGTACTCAATGATTTTACCGACGTAAGTTTCAAT
AAGCCTTCAGAAAAAGAAGCGAATGATTTCTTATCAAAACAGGATTTTACACGATTGGAGCCATTTGAAGTTCAACTTCT
GCAACTCAAACGTGACAGAAAAATTCTTGAATTTTTGGAAAAATGCGTATTTCATAAACGCAATATCATTATTGCAGGCA
AAACAGGATCAGGTAAAACAACATTTGCTCGTTCCTTAATCGAAAAGGTGCCTACAGAAGAGCGTATTATTACGATTGAG
GATGTTCATGAGCTTTTTTTACCCAATCATCCCAATCATGTGCATATGCTTTATGGTGACGATGTGGATCGTGTTTCAGC
TGATGAGTGTTTAGATGCATGTATGCGTCAATCGCCTGACCGTATTTTTCTCGCTGAACTGCGTGGTAATGAGGCATGGG
AATATCTCAACTCATTAAATACTGGCCATCCCGGATCAATTACCACAACACATGCCAACAATGCTTTGCAAACGTTCGAA
CGGTGTGCCACATTGGTCAAAAGATCAGAAATTGGCCGCCAACTCGATCTAGAAATGATAAAGATGGTGCTCTACACCAC
AATTGATGTAGTGCTATTCTTTAAGGATCGAAAGCTTTCTGAAGTTTTTTACGACCCAGTTTTTTCTAAATCGAAGATAA
CTTAA

Protein sequence : 
MTSSFLQTLITAIIVYNGMVPKSINYVLLPGGQRGTIVQTPAVIDGTLSFMIRKHSLMVKTLEELNEEGVLNDFTDVSFN
KPSEKEANDFLSKQDFTRLEPFEVQLLQLKRDRKILEFLEKCVFHKRNIIIAGKTGSGKTTFARSLIEKVPTEERIITIE
DVHELFLPNHPNHVHMLYGDDVDRVSADECLDACMRQSPDRIFLAELRGNEAWEYLNSLNTGHPGSITTTHANNALQTFE
RCATLVKRSEIGRQLDLEMIKMVLYTTIDVVLFFKDRKLSEVFYDPVFSKSKIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwD YP_001610494.1 TrwD protein Virulence Not named Protein 1e-127 87
trwD CAD42862.1 TrwD protein Not tested trw-PAI Protein 9e-128 87
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 3e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1165 YP_006665578.1 TrwD protein VFG2269 Protein 2e-128 90
RM11_1165 YP_006665578.1 TrwD protein VFG2218 Protein 2e-37 42
RM11_1165 YP_006665578.1 TrwD protein VFG2240 Protein 5e-37 41