Gene Information

Name : RM11_1159 (RM11_1159)
Accession : YP_006665572.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : trwI1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1477832 - 1478716 bp
Length : 885 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTTCAAAATGTTTACGCAACTGTTCACTGAAATTGATCAGGCAATAACAACATATGTCACGGGTATTTCATCAAA
GGCCATTGCTACAATGACCCCCTTCGTATCCATCAGTCTTACCATCGCCTTCATCGTCTATGGATGGCTCATTATGCGTG
GGGCAATAGATATGCCAGTCTCTGGATTCTTGAGCCGTTGCCTGCGAATCAGCATTATTACTTCAATTGCATTAACTACA
GGGCTATATCAGAAAGATCTGGCAGATTTGATAATAAAAATGCCTAATGAGCTGGTAAGCACGCTGATAAGCAATCCACT
AACAGATAATCAATTCACTAACTTGATTGACAAAGTGGCTGAAAAAGGTTTCGACCGTGCAAGCGAAGCTTTCGAGGAAT
CCGCTTTCTTGAATGCCGATGGGTTGCTTTTCGGTCTCTTCGGCATCCTCATCTTGCTTGCAACAAGCTTCCTCGTAGCA
ATCGGTGGTGCATTTATTCTGTTAGCAAAAATCGCACTTATACTTCTCGCCGGACTCGGACCTTTCTTCATCATTGCATT
ACTCTGGCAACCAACCTATCGCTTTTTCGAGCAATGGATAGGCCAAGTCTTGAGCTACATAATTCTCATTGTGCTTCTCG
CCACTATATTTAGTCTAATGATGAATATCTTTGCAAATTACATGGAAGATCTGAAATTTGATGGACAGCAAAATATCGGT
TACACACTTGGTGGTGCGCTCATCTTGTCCATTACCTCCATTATGCTGTTGCTCAAACTATCCAGCATTGCGAGTGCTTT
GGCAAAAGGCATTACCTTTGGACATCTCTGGAGACACGGTGCAGGGGTAGGCAATGCTTCTCAAAAAAGTCGCATAGCCA
AATGA

Protein sequence : 
MAFKMFTQLFTEIDQAITTYVTGISSKAIATMTPFVSISLTIAFIVYGWLIMRGAIDMPVSGFLSRCLRISIITSIALTT
GLYQKDLADLIIKMPNELVSTLISNPLTDNQFTNLIDKVAEKGFDRASEAFEESAFLNADGLLFGLFGILILLATSFLVA
IGGAFILLAKIALILLAGLGPFFIIALLWQPTYRFFEQWIGQVLSYIILIVLLATIFSLMMNIFANYMEDLKFDGQQNIG
YTLGGALILSITSIMLLLKLSSIASALAKGITFGHLWRHGAGVGNASQKSRIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwI4 CAD42854.1 TrwI4 protein Not tested trw-PAI Protein 3e-62 69
trwI2 CAD42849.1 TrwI2 protein Not tested trw-PAI Protein 3e-62 69
trwI5 CAD42857.1 TrwI5 protein Not tested trw-PAI Protein 3e-62 69
trwI1 YP_001610478.1 TrwI1 protein Virulence Not named Protein 6e-62 69
trwI4 YP_001610486.1 TrwI4 protein Virulence Not named Protein 4e-62 69
trwI2 YP_001610481.1 TrwI2 protein Virulence Not named Protein 4e-62 69
trwI5 YP_001610489.1 TrwI5 protein Virulence Not named Protein 4e-62 69
trwI1 CAD42846.1 TrwI1 protein Not tested trw-PAI Protein 5e-62 69
trwI3 YP_001610484.1 TrwI3 protein Virulence Not named Protein 1e-61 68
trwI3 CAD42852.1 TrwI3 protein Not tested trw-PAI Protein 1e-61 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1159 YP_006665572.1 trwI1 protein VFG2264 Protein 9e-75 77
RM11_1159 YP_006665572.1 trwI1 protein VFG2261 Protein 2e-75 76