Gene Information

Name : RM11_1153 (RM11_1153)
Accession : YP_006665566.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : trwL5 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1472444 - 1472680 bp
Length : 237 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCATCCTGCGTATGCGCAAGTGAGCGGTTTGGCGAATGCTCAAAAGGCTTTAAACAGCTTCAAAAAACAATTGGA
TATAATTATTCCTGTTGCTGCTGCCCTTATACTTTTATGCTTAGCAATTAGTTATGCAGGACGCTACATCGAAAAAGATA
CATTCATACGGTGGGCAATCGGCGTTGTCATCGCTGGTTCAGCAACTCAAATCGCCACTATGTTGTTCTCAGGTTAA

Protein sequence : 
MAHPAYAQVSGLANAQKALNSFKKQLDIIIPVAAALILLCLAISYAGRYIEKDTFIRWAIGVVIAGSATQIATMLFSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwL3 CAD42838.1 TrwL3 protein Not tested trw-PAI Protein 2e-10 67
trwL3 YP_001610470.1 TrwL3 protein Virulence Not named Protein 3e-10 67
trwL6 CAD42841.1 TrwL6 protein Not tested trw-PAI Protein 2e-10 66
trwL6 YP_001610473.1 TrwL6 protein Virulence Not named Protein 3e-10 66
trwL2 CAD42837.1 TrwL2 protein Not tested trw-PAI Protein 9e-11 65
trwL2 YP_001610469.1 TrwL2 protein Virulence Not named Protein 1e-10 65
trwL5 CAD42840.1 TrwL5 protein Not tested trw-PAI Protein 8e-11 65
trwL5 YP_001610472.1 TrwL5 protein Virulence Not named Protein 1e-10 65
trwL1 YP_001610468.1 TrwL1 protein Virulence Not named Protein 6e-10 65
trwL1 CAD42836.1 TrwL1 protein Not tested trw-PAI Protein 4e-10 65
trwL4 CAD42839.1 TrwL4 protein Not tested trw-PAI Protein 3e-10 63
trwL4 YP_001610471.1 TrwL4 protein Virulence Not named Protein 5e-10 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1153 YP_006665566.1 trwL5 protein VFG2252 Protein 2e-12 70
RM11_1153 YP_006665566.1 trwL5 protein VFG2250 Protein 1e-11 63
RM11_1153 YP_006665566.1 trwL5 protein VFG2253 Protein 6e-11 62
RM11_1153 YP_006665566.1 trwL5 protein VFG2255 Protein 9e-11 59
RM11_1153 YP_006665566.1 trwL5 protein VFG2251 Protein 6e-10 56
RM11_1153 YP_006665566.1 trwL5 protein VFG2256 Protein 4e-09 52
RM11_1153 YP_006665566.1 trwL5 protein VFG2254 Protein 2e-08 50