Gene Information

Name : RM11_1152 (RM11_1152)
Accession : YP_006665565.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : trwL4 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1471883 - 1472200 bp
Length : 318 bp
Strand : +
Note : -

DNA sequence :
ATGAAACAATTAGACAACCTACGATCAAAAAGTAACGACAAAATTATTGCAATTGCTGCAGCTGTGACTGTACTTTTTAT
GGCTTATCCTGCGTATGCTCAAGTACAAGCTTTAAGTAACGCTAAAAATGTTCTAGAAAGCCTGCAGAGTGAACTTACTA
CGAAAATTATACCTATTGCTGCTGCCCTCATACTTTTATGCTTAGCAATTGGTTATGCAGGACGCTATATCGAAAAAGAT
ACATTCATACGGTGGGCAGTCGGCGTTATCATCGCTGGTTCAGCAACCCAAATCGCCACAATGCTTTTTAAACCTTGA

Protein sequence :
MKQLDNLRSKSNDKIIAIAAAVTVLFMAYPAYAQVQALSNAKNVLESLQSELTTKIIPIAAALILLCLAIGYAGRYIEKD
TFIRWAVGVIIAGSATQIATMLFKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwL3 CAD42838.1 TrwL3 protein Not tested trw-PAI Protein 3e-18 62
trwL3 YP_001610470.1 TrwL3 protein Virulence Not named Protein 5e-18 62
trwL2 CAD42837.1 TrwL2 protein Not tested trw-PAI Protein 5e-18 62
trwL2 YP_001610469.1 TrwL2 protein Virulence Not named Protein 7e-18 62
trwL5 CAD42840.1 TrwL5 protein Not tested trw-PAI Protein 7e-18 61
trwL5 YP_001610472.1 TrwL5 protein Virulence Not named Protein 1e-17 61
trwL4 CAD42839.1 TrwL4 protein Not tested trw-PAI Protein 4e-18 61
trwL4 YP_001610471.1 TrwL4 protein Virulence Not named Protein 5e-18 61
trwL6 CAD42841.1 TrwL6 protein Not tested trw-PAI Protein 3e-17 60
trwL6 YP_001610473.1 TrwL6 protein Virulence Not named Protein 4e-17 60
trwL1 CAD42836.1 TrwL1 protein Not tested trw-PAI Protein 6e-17 59
trwL1 YP_001610468.1 TrwL1 protein Virulence Not named Protein 8e-17 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1152 YP_006665565.1 trwL4 protein VFG2256 Protein 9e-24 70
RM11_1152 YP_006665565.1 trwL4 protein VFG2251 Protein 3e-24 69
RM11_1152 YP_006665565.1 trwL4 protein VFG2255 Protein 1e-20 68
RM11_1152 YP_006665565.1 trwL4 protein VFG2254 Protein 2e-21 65
RM11_1152 YP_006665565.1 trwL4 protein VFG2250 Protein 9e-20 64
RM11_1152 YP_006665565.1 trwL4 protein VFG2252 Protein 2e-17 61
RM11_1152 YP_006665565.1 trwL4 protein VFG2253 Protein 3e-18 59