Gene Information

Name : ARUE_c05260 (ARUE_c05260)
Accession : YP_006660499.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 541259 - 542080 bp
Length : 822 bp
Strand : -
Note : Fe3+-siderophore ABC transporter ATP-binding protein

DNA sequence : 
ATGAGCCTCACCACTGCCGCGCCGCAGCTCCACGCCGACGCGTTGACCATCGGCTACGAGCAACGCATCATCTCCGAGAA
CCTCAATGTGCGCATCCCCGAGGGGCAGTTCACGGTGATCGTGGGGCCCAACGCCTGCGGTAAGTCCACGCTGCTGCGCG
CCCTCGCACGGCTGATCAAGCCCAAGAGCGGACAGGTGCTGCTGGACGGGAAATCTGTGACATCGCTGCCTGCAAAGGAA
CTTGCCCGGCGTCTGGGTCTCCTCCCGCAGTCGTCCATCGCCCCCGACGGCATTACCGTGGCGGACCTGGTGGCGCGTGG
CCGGTACCCGCACCAGAAGCTGCTCCGGCAATGGTCTGAGTCCGATGAGATTGCCGTGGTTGAGGCGATGGAGGCCACCG
GCGTTTCGTCGTTATCCGGGCGGCTGGTGGACGAACTGTCCGGAGGCCAGCGGCAGCGAGTGTGGGTGGCCATGGTCCTC
GCCCAGCAGACCCCGCTCATGCTCCTGGACGAGCCAACCACGTTCCTTGATATCGCCCACCAGATCGAGCTGTTGGAACT
CTTCCGCGAGCTCAACCTGGACAAGGGCCACACCCTTGTTGCCGTGCTGCACGACCTCAACCACGCCAGCCGCTACGCAG
ACCACATCATCGCCATGAAGGACGGTGCCGTGGCCGCCGAGGGCGCTCCCGCTGACGTGATCACTGAGTCCTTGGTGGAA
GAAGTGTTCGGCATGGCCTGCCGGATCATTGACGACCCCGTGACGCACACGCCGCTGGTGGTCCCGCTGGGCAGGCCGCG
GCACTCAGCCGTTACGGACTAA

Protein sequence : 
MSLTTAAPQLHADALTIGYEQRIISENLNVRIPEGQFTVIVGPNACGKSTLLRALARLIKPKSGQVLLDGKSVTSLPAKE
LARRLGLLPQSSIAPDGITVADLVARGRYPHQKLLRQWSESDEIAVVEAMEATGVSSLSGRLVDELSGGQRQRVWVAMVL
AQQTPLMLLDEPTTFLDIAHQIELLELFRELNLDKGHTLVAVLHDLNHASRYADHIIAMKDGAVAAEGAPADVITESLVE
EVFGMACRIIDDPVTHTPLVVPLGRPRHSAVTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-65 52
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-67 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-67 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-67 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-67 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-67 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-67 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-53 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-53 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c05260 YP_006660499.1 Fe3+-siderophore ABC transporter, ATP-binding protein BAC0164 Protein 2e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c05260 YP_006660499.1 Fe3+-siderophore ABC transporter, ATP-binding protein VFG0925 Protein 3e-82 58
ARUE_c05260 YP_006660499.1 Fe3+-siderophore ABC transporter, ATP-binding protein VFG1042 Protein 2e-53 47