Gene Information

Name : ARUE_c38960 (ARUE_c38960)
Accession : YP_006663806.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4278602 - 4279426 bp
Length : 825 bp
Strand : -
Note : Fe3+-siderophore ABC transporter ATP-binding protein

DNA sequence : 
ATGGCCATCCTTAATGCCCAGGACCTGACGCTCCAATACGAGGCACGCAAGGTTGTGGAGGGACTCTCCACCGAGATCCC
CGAAGGCAAAGTGACCATGATCGTGGGCGCCAACGCCTGCGGCAAGTCCACCCTGCTGCGCGGTCTTTCGCGGCTGCTCA
AGCCCGCCCGCGGCACGGTGACCTTGGACGGCAAAGACATCCACACCCGGCCCGCCCGCGAACTCGCCCGGACACTCGGC
CTCCTGCCGCAGCACCCCACCGCTCCTGACGGCATCACCGTCCGGGACCTCGTAGGCCGCGGCCGCTACCCCCACCAAGG
CTTCTTCCGCAGCTGGAGCGCAGCCGACGACGCCGCAGTGCAGCGCGCGCTCGACGCCACCGCCACGCTTGAACTCGCTG
AGCGGAGCATCGACGAACTGTCAGGCGGGCAACGCCAACGGGTCTGGATCGCCATGGCTCTGGCACAGGAAACCGACGTC
CTGCTGTTGGACGAACCCACCACATACCTTGACCTGGCACATCAGGTGGAAGTCCTGGACCTGATCACGGACCTCAACCG
AAGCCGCGGCACCACGGTGGCGATCGTGCTCCACGACCTCAACCTCGCCGCACGCTACGCAGACCATGTCATCGCCATGA
AAGGCGGGTGCATCGTGGCCGAAGGTCCGGCGCCGGTGGTGGTCACAGAGGAACTGGTCTTCAACGTTTTCGGCCTGGAA
TCCCGAGTGGTTCCGGACCCCATCTCAGGCACACCGCTCATCGTCCCCATCGGACGCCACCACGCACGCCCCGCTTCAAC
CAACGAACTGGAGATCGCCTCATGA

Protein sequence : 
MAILNAQDLTLQYEARKVVEGLSTEIPEGKVTMIVGANACGKSTLLRGLSRLLKPARGTVTLDGKDIHTRPARELARTLG
LLPQHPTAPDGITVRDLVGRGRYPHQGFFRSWSAADDAAVQRALDATATLELAERSIDELSGGQRQRVWIAMALAQETDV
LLLDEPTTYLDLAHQVEVLDLITDLNRSRGTTVAIVLHDLNLAARYADHVIAMKGGCIVAEGPAPVVVTEELVFNVFGLE
SRVVPDPISGTPLIVPIGRHHARPASTNELEIAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-62 55
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-63 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-63 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-52 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-50 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-52 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-52 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-52 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-52 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-52 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c38960 YP_006663806.1 Fe3+-siderophore ABC transporter, ATP-binding protein BAC0164 Protein 1e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c38960 YP_006663806.1 Fe3+-siderophore ABC transporter, ATP-binding protein VFG0925 Protein 6e-68 55
ARUE_c38960 YP_006663806.1 Fe3+-siderophore ABC transporter, ATP-binding protein VFG1042 Protein 1e-50 48