Gene Information

Name : ARUE_c34100 (ARUE_c34100)
Accession : YP_006663329.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Virulence
Product : metal-binding extracellular protein interacting with ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3750644 - 3751588 bp
Length : 945 bp
Strand : -
Note : ABC transporter metal-binding extracellular protein

DNA sequence : 
ATGCCTAACTTTTCGTTTCGGCGCGCCAAAGACGTCCGCCGTTTCGCTGCTGTCCTGACCGCGATCTCACTTGCCCTGGG
GGTCTCCGCCTGCGGAGGGAACTCATCCGCGGGGGGTGATGACAAGCCCGTTGTCCTGACCACGTTTACTGTTTTGGCTG
ATGTGGCCAAGAACGTTGCGGGGGACAAGCTCCGCGTGGAGTCCATCACCAAAGCCGGAGCTGAGATCCACGGCTACGAG
CCAACGCCGGGGGACATCCGCAAGGCCGCCCAAGCTGACCTTATCTTGGACAACGGACTCAATCTCGAGGCCTGGTTCGC
CCAGTTCGTGGAGGACTTGGATGTGCCGCACGCGGTAGTTAGTGACGGGGTGGACGTTATGCCCATTGCCGAGGATTCCT
ACCAGGGCAAGCCGAACCCGCATGCGTGGATGTCGCCCAAGAATGTGCAGATCTACGCTGACAACATGGCCAAGGCCTTC
GCCAAGCTGGATCCTTCCCACGCTGCCGAGTTCGAGGCCAACGCCAAGGCTTACAACGCCCAGCTCCAAACCGTGCAGGA
CGAGATGGTGTCCAAGCTCTCCGTCCTTTCGGAGAAGCAGAGGGCGCTGGTCACCTGCGAAGGAGCATTCTCCTACCTGG
CCCGCGATGCCGGCCTCAAAGAGGTGTACATCTGGGCTGTGAACGCGGAGCAGCAGGCTACACCGCAGCAGATTACGCGG
GCCATCGAGTTCGTCAAGGACAACCAGGTTCCGGCGGTGTTCTGTGAGTCCACGGTGTCCGACGCACCCATGCAGCAGGT
TGTCGGAGCCACTGATGCCAAGTTCGGTGGGGTGCTCTACGTTGATTCCCTCTCTGAAGCGGACGGGCCCGTACCCACCT
ATCTGGACCTCATGCGCCATGACGCCAAAGTCATCACCACTGCACTCACCGGAGGAACGCCGTGA

Protein sequence : 
MPNFSFRRAKDVRRFAAVLTAISLALGVSACGGNSSAGGDDKPVVLTTFTVLADVAKNVAGDKLRVESITKAGAEIHGYE
PTPGDIRKAAQADLILDNGLNLEAWFAQFVEDLDVPHAVVSDGVDVMPIAEDSYQGKPNPHAWMSPKNVQIYADNMAKAF
AKLDPSHAAEFEANAKAYNAQLQTVQDEMVSKLSVLSEKQRALVTCEGAFSYLARDAGLKEVYIWAVNAEQQATPQQITR
AIEFVKDNQVPAVFCESTVSDAPMQQVVGATDAKFGGVLYVDSLSEADGPVPTYLDLMRHDAKVITTALTGGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-72 54
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 9e-73 53
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 9e-73 53
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 9e-73 53
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 7e-73 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c34100 YP_006663329.1 metal-binding extracellular protein interacting with ABC transporter BAC0349 Protein 4e-73 53
ARUE_c34100 YP_006663329.1 metal-binding extracellular protein interacting with ABC transporter BAC0439 Protein 3e-68 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ARUE_c34100 YP_006663329.1 metal-binding extracellular protein interacting with ABC transporter VFG0525 Protein 4e-73 53