|
Name : ARUE_c34080 (ARUE_c34080) Accession : YP_006663327.1 Strain : Arthrobacter sp. Rue61a Genome accession: NC_018531 Putative virulence/resistance : Virulence Product : permease component of ABC-type metal cation transporter Function : - COG functional category : - COG ID : - EC number : - Position : 3749046 - 3749909 bp Length : 864 bp Strand : - Note : metal cation ABC transporter permease DNA sequence : GTGGAATTCCTCCTTGAACCTCTCAGCTACGACTTCATGGTCCGGGCGCTTGCAACTACGGCCATCGCCGCCGTGGTCTG CGCGGTCCTGAGCTGCTGGCTCGTCCTGATCGGCTGGTCCCTCATGGGCGACGCCGTCTCACACGCGGTGCTTCCCGGCG TCGTCCTCGCGTACATCGTGGGTGCGCCCTTCGCGCTGGGTGCGTTGGTGTTCGCGCTGATCGCGGTGACGTTGATCGGG GTGGTACGGAATACCAGCCGCGTGAAGGAAGACGCGGCGATCGGCATCGTGTTCACCTCGCTGTTCGCGCTGGGCCTGGT GCTGATCTCCGTGACCCCGAGCCAGACTGACTTGAACCACATCATCTTCGGGAACCTGCTGGGCGTCAGCATCCCGGACC TCATCCAGGTGGTTGTCCTGGGCGTCGTGGCGTTTGCGATCCTGATCCTCAAACGACGCGACCTCACGCTCTACGCGTTT GACCCCACGCACGCCCACGCCATCGGCTTGTCACCCAAACGGCTGGGCGCCCTGCTCCTGGGCCTGCTGGCGCTGACCTC CGTGGTAGCCCTGCAGACCGTGGGTGTGGTGTTGGTGGTGGCCATGCTGATCATCCCGGGTGCCACGGCCTACCTGCTGA CCGACCGTTTTTCCCGGATGCTGGTGATTGCGCCCGTGATCTCGGTGGTGTGCTCCGTCGCCGGCATCTACCTCAGTTAT TACCTGGACACGGCGTCGGGGGCCATGGTGGTGCTCACTCAAGGCGTGGTGTTCGCCGTCGTGTATTTGTTCAGCCCACG GCAGGGGCTCATCGGTACGCGGCTGGCGAAGGCCCGCCGGAAGCGGGCCGTCGCCACGGTGTAG Protein sequence : MEFLLEPLSYDFMVRALATTAIAAVVCAVLSCWLVLIGWSLMGDAVSHAVLPGVVLAYIVGAPFALGALVFALIAVTLIG VVRNTSRVKEDAAIGIVFTSLFALGLVLISVTPSQTDLNHIIFGNLLGVSIPDLIQVVVLGVVAFAILILKRRDLTLYAF DPTHAHAIGLSPKRLGALLLGLLALTSVVALQTVGVVLVVAMLIIPGATAYLLTDRFSRMLVIAPVISVVCSVAGIYLSY YLDTASGAMVVLTQGVVFAVVYLFSPRQGLIGTRLAKARRKRAVATV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-41 | 48 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-41 | 48 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-41 | 48 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 1e-40 | 47 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 8e-41 | 47 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-42 | 45 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 2e-42 | 45 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-42 | 45 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-42 | 45 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 1e-42 | 45 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 3e-30 | 43 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 2e-30 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | BAC0441 | Protein | 6e-43 | 49 |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | BAC0442 | Protein | 2e-40 | 48 |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | BAC0352 | Protein | 5e-41 | 47 |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | BAC0351 | Protein | 9e-43 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | VFG0528 | Protein | 4e-41 | 47 |
| ARUE_c34080 | YP_006663327.1 | permease component of ABC-type metal cation transporter | VFG0527 | Protein | 8e-43 | 45 |
