|
Name : gabD4 (ARUE_c21110) Accession : YP_006662053.1 Strain : Arthrobacter sp. Rue61a Genome accession: NC_018531 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NAD(P)+] Function : - COG functional category : - COG ID : - EC number : 1.2.1.- Position : 2329495 - 2330949 bp Length : 1455 bp Strand : - Note : - DNA sequence : ATGACCCCCTCATTCGATCCCAGTTCACTGCAGACAGACCTGTTCATCGACGGACGCTGGCGGCAGGCCACCAACGGCGC CACTTTTGAAGTGGAAAACCCCGCCACGAACGAAGTCATCGCCCACGTCGCCGACGGCAGCCCCGAGGATGCCGCCCTGG CCATCGAGGCCGCCGGACGCGCCCAGGCAGCCTGGGGAAAATCCACGCCCCGGGAACGCGCAGACATTCTCCGCCGCGCG TACGACCTCGTCATTGCCAATACGGAGCGATTGGCAGCCATCATGACCGCCGAGATGGGCAAACCATTCATGGAGGCAAA GGGCGAAGTGGCCTATGGCGCCGATATGCTCCGCTGGTTCTCCGAAGAGGCAGTACGGATCGGCGGAGACAACGCCAGCT CCGTAGACGGCAACACGCGTATCCTCATCACCAAGGAACCGGTTGGTCCCTCCGTGCTGGTGACGCCATGGAACTTCCCG CTCGCCATGGGCGCGCGGAAGATCGCACCGGCAGTTGCTGCCGGTTGCACCATGGTGTTCAAGCCCGCCGAGCTGACGCC CCTGACGTCGTTGGCCCTCGTTGCGATCTTCAAGGAAGCAGGACTTCCCGACGGCGTACTGAACGTTGTGACGACGTCGA GCGCCTCCAGCGTGGTCAGGACCTGGACGGACAGCGGGATTGCGCGCAAGATCAGCTTCACGGGTTCCACGGAAGTGGGA AAGATCCTCCTGCGCCAGGCTGCTGACAACGTCATGCGGTCCTCCATGGAACTCGGCGGAAACGCCCCCTTCATCGTGCT GGCCGATGCGGACATCGAGAAGGCCGTGGATGGAGCCATGAAAGCCAAGATGCGGAACATGGGCGAGGCCTGCACGGCCG CCAACCGCTTCTTCGTCCACCGCTCCGTAGTGGAAGACTTTGGCGAGAAGTTCTCCAAAAAGATGTCAGAATTGCAGGTA GGCAATGGCGCTTCGGCAGGGACCGACGTCGGACCCCTGATTGAACAGAAGGGCCTGGAAAAAGTCGAAAGCCTGGTCGC GGACGCCGTATCCAAGGGCGCACGTATCCTAACCGGCGGCAGCCGTCCGGAAGGGCCTGGCTACTTCTACTCCCCCACCG TCCTTGTGGACGTACCCAGGGACGCAGCGTTGATGTCCACGGAAATCTTCGGCCCTGTAGCTGCCATTACACCGTTTGAC AGCGAAGACGAAGTCGTACGCCTGGCCAACGATACTGAATGGGGCCTGGTGGGGTACGTCTTCACGGAGAGCATGGACAA GGCCATGCGGTTCTCCGCGGATCTGGAAGTGGGAATGGTTGGGCTGAACACCGGCTTGGTATCCAATCCCGCCGCGCCGT TCGGTGGCGTCAAACAGTCCGGGTTGGGACGCGAAGGCGGGAAAATTGGGATTGAAGAGTTTTTGGAATACAAGTACACC GCAGTAGCGGTCTAA Protein sequence : MTPSFDPSSLQTDLFIDGRWRQATNGATFEVENPATNEVIAHVADGSPEDAALAIEAAGRAQAAWGKSTPRERADILRRA YDLVIANTERLAAIMTAEMGKPFMEAKGEVAYGADMLRWFSEEAVRIGGDNASSVDGNTRILITKEPVGPSVLVTPWNFP LAMGARKIAPAVAAGCTMVFKPAELTPLTSLALVAIFKEAGLPDGVLNVVTTSSASSVVRTWTDSGIARKISFTGSTEVG KILLRQAADNVMRSSMELGGNAPFIVLADADIEKAVDGAMKAKMRNMGEACTAANRFFVHRSVVEDFGEKFSKKMSELQV GNGASAGTDVGPLIEQKGLEKVESLVADAVSKGARILTGGSRPEGPGYFYSPTVLVDVPRDAALMSTEIFGPVAAITPFD SEDEVVRLANDTEWGLVGYVFTESMDKAMRFSADLEVGMVGLNTGLVSNPAAPFGGVKQSGLGREGGKIGIEEFLEYKYT AVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-103 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-104 | 46 |
