Gene Information

Name : clpB2 (ARUE_c20120)
Accession : YP_006661955.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Virulence
Product : chaperone protein ClpB 2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2207350 - 2209986 bp
Length : 2637 bp
Strand : +
Note : -

DNA sequence :
ATGAACATGGAGAGCTTTACCCAGAAGTCGCAGGAGGCGTTGGCAGGGGCACAGCGGATCGCCCAGCTACACGGCCATAC
CGAGACCGACGGGGAGCACCTGCTTGCGGCCCTGCTGGAACAGGAGGCGGGACTGGTCCCGCGACTGCTCGCAGGCATGC
AGATTGACGTTGAGGAGCTGAACAGGGCGGTCGAGACCGAGCTGCAAAAGAAGCCGAAAGTCACGGGGCCTGGCGCAGCA
CCCGGTCAGGTGTACGTCAGCCGCAGGCTGGGCACACTCCTTGATGCTGCTGAACGTGAAGCCAAACGGCTCAAAGACGA
GTACGTCTCGGTGGAACACCTGCTGGTCGCGCTTGCGGAGGAAGGCCGGGCATCGGCGGCCGGCAGGGTGCTGGCGGAAC
ACGGCATTACCCGCGAGGCATTCTTGTCGGTCCTGACCCAGGTTAGGGGAAACCAGCGCGTTACCTCGGCAACGCCGGAA
CAAACCTACGAAGCGCTGGAGAAGTACGGCCGCGATCTGGTGGCGGACGCGCGTACCGGAAAGCTGGATCCGGTCATCGG
CCGCGACTCGGAAATCCGGCGGGTTGTCCAGATACTGTCACGCAAGACCAAAAACAACCCGGTGCTTATCGGTGAGCCTG
GAGTCGGCAAAACCGCCATTGTGGAGGGACTGGCCCAGCGGATCGTCCGGCAGGATGTGCCCGAAGGCCTGAAGAACAAG
ACCATTTTCTCGCTGGACCTGAGCGCCCTGGTGGCCGGTGCCAAGTACCGCGGCGAATTCGAGGAACGGTTGAAGGCTGT
GCTGGCCGAGGTGCTGGCGGCAGAAGGCAGGATCCTGCTCTTTGTGGACGAACTGCACACCGTCGTCGGGGCAGGCGCTT
CCGAGGGGTCGATGGACGCCGGCAACATGCTGAAGCCCATGTTGGCCCGCGGGGAGCTGCACATGATCGGCGCTACCACG
CTCGACGAATACCGCAAACACATCGAGTCTGACGCCGCATTGGAGCGCCGCTTCCAGCCGGTCACGGTTGAGGAGCCCGA
CGTCGAGGACGCCATTTCAATCCTTCGAGGCTTGCGGGAGCGACTCGAGGTATTCCATGGCGTACGGATCCAGGATAGTG
CCCTGGTGGCCGCGGCCACCCTTTCCCACCGGTACATCACTGACCGGTTTCTTCCCGACAAGGCCATTGACCTTGTGGAT
GAAGCGTGCGCCCGGCTCAGGACGGAAATCGACTCGATGCCGGCGGAACTGGATGAGCTCACCCGGAAGGTCACGCGGCT
CGAAATCGAAGAAGCGGCACTTGCCAAGGAAACCGATCCGGCCAGCAAGACCCGGCTCACGGAGTTGAGGCGTGAATTGG
CGGACTTGCGCGCCGAAGCCGACGCCAAGAGGGCCCAATGGGAGGCCGAGCGCCAGGCGATCCACAAACTGCAGGAAATA
CGTACTGAACTGGAGCGGGCGCGGCTGGAGGCTGAGGAAGCCGAACGGAATTACGACCTCAACCTGGCGGCAGAGCTACG
CTACGGGCGACTTGCCGACCTCGAACGGCGGCTGGCCGCCGAAGAAGAACGGCTGACCGCTAAACAGGGCGAAAAGCGCT
TGCTCCGCGAGGTGGTGACCGAGGACGAGATCGCCGACATTGTCGCGGCCTGGACCGGGATACCGGTCGCCCGGCTGAAG
CAGGGCGAACGGGAGAAGGTCCTTCACCTGGATGAAATCCTTCGCGCCCGCGTCGTCGGACAGGAAGAAGCGATTACCGC
GGTGTCGGACGCCATTATCCGGGCCCGCTCCGGTATCCGGGATCCCCGGCGACCCATTGGCTCCTTCATCTTCCTCGGCC
CCACGGGAGTCGGGAAAACCGAGCTTGCCAAGGCATTGGCTGCATCGCTATTTGACAGCGAGAACGCAATGATCCGGCTG
GATATGAGCGAGTATCAGGAACGCCACACAGTGAGCCGCCTGCTGGGCGCTCCGCCCGGCTACATCGGCTACGACGAAGG
AGGACAGCTCACAGAAGCGGTACGCCGGAAGCCATACTCGGTGGTGCTCTTTGACGAGGTGGAAAAGGCCCATCCGGACA
TCTTTAACACCTTGTTACAGGTGCTCGACGACGGACGGATTACAGACTCGCAGGGCCGGACGGTCGATTTCCGCAACACT
GTCATCATTATGACGTCCAATATTGGCTCCCAGTATCTTCTGGAAGGTTCGGCCGAAGGAGGGACGATCACGGAGGAGGC
GCGCGGCATGGTGTTGGGTGAGCTCCGGGCGCACTTCCGACCCGAGTTCCTTAACCGCGTCGACGACACGGTCCTGTTCG
CGCCCTTGGGACTGGCGCAAATCGAACGAATCGTTGATCTGCTGTTTCAGCAGCTGCGGCAGCGGCTGGCCGAGCAGCAA
ATAGAGCTGCACCTGACCGAAGAAGCACGCCTTCTGATTGCCGAACGGGGCTTCGATCCGGTCTACGGAGCCCGGCCCTT
GCGCCGCTATATTTCCCATGTTGTCGAAACGCAGGTGGGTCGGGCCTTGCTGCGCGGAAGCATCGAGGAGGGCGGAGTGA
TCACAGTGACCGTATCCGGAAACCAGCTCGTGGTTGAATACAACACATCGGAGCTAGAGGAGGCCGGAACCACATGA

Protein sequence :
MNMESFTQKSQEALAGAQRIAQLHGHTETDGEHLLAALLEQEAGLVPRLLAGMQIDVEELNRAVETELQKKPKVTGPGAA
PGQVYVSRRLGTLLDAAEREAKRLKDEYVSVEHLLVALAEEGRASAAGRVLAEHGITREAFLSVLTQVRGNQRVTSATPE
QTYEALEKYGRDLVADARTGKLDPVIGRDSEIRRVVQILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRQDVPEGLKNK
TIFSLDLSALVAGAKYRGEFEERLKAVLAEVLAAEGRILLFVDELHTVVGAGASEGSMDAGNMLKPMLARGELHMIGATT
LDEYRKHIESDAALERRFQPVTVEEPDVEDAISILRGLRERLEVFHGVRIQDSALVAAATLSHRYITDRFLPDKAIDLVD
EACARLRTEIDSMPAELDELTRKVTRLEIEEAALAKETDPASKTRLTELRRELADLRAEADAKRAQWEAERQAIHKLQEI
RTELERARLEAEEAERNYDLNLAAELRYGRLADLERRLAAEEERLTAKQGEKRLLREVVTEDEIADIVAAWTGIPVARLK
QGEREKVLHLDEILRARVVGQEEAITAVSDAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKALAASLFDSENAMIRL
DMSEYQERHTVSRLLGAPPGYIGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDIFNTLLQVLDDGRITDSQGRTVDFRNT
VIIMTSNIGSQYLLEGSAEGGTITEEARGMVLGELRAHFRPEFLNRVDDTVLFAPLGLAQIERIVDLLFQQLRQRLAEQQ
IELHLTEEARLLIAERGFDPVYGARPLRRYISHVVETQVGRALLRGSIEEGGVITVTVSGNQLVVEYNTSELEEAGTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-105 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB2 YP_006661955.1 chaperone protein ClpB 2 VFG2076 Protein 3e-113 43
clpB2 YP_006661955.1 chaperone protein ClpB 2 VFG2084 Protein 1e-103 43