Gene Information

Name : ssuB (ARUE_c13540)
Accession : YP_006661311.1
Strain : Arthrobacter sp. Rue61a
Genome accession: NC_018531
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transporter ATP-binding protein SsuB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1476537 - 1477265 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
GTGGCAACGCACACTGGCGGGCTAAGCACCCTCCGGACCGGCCCCTCCTACGAAGTCTCCGTCCGGAACCTCATTCGCAG
CTTCGGCCCGAAAGGCGTACTCAACGGGGTGGACCTTGATATCGCACCGGGCGAGTTCGTTGCCCTCCTCGGCCCCAGCG
GCTGCGGCAAGAGCACCCTGCTGCGTGCCCTCGCCGGACTGGACGGTGACGTCCGCGGCAGCGGAGTGGTGAAGGTCCCG
GAGCAGGTGTCCGTGGTGTTCCAGGACTCGCGCCTGCTGCCGTGGGACACCGTGTTGGGCAACGTCACCTTGGGACTCAG
GGATCACGACGCCGATGCCCGCGGCCGCCGCGCGCTCGCCGAAGTGGGACTCGCCGGTCGCGAAAAGGCGTGGCCACACG
AACTGTCCGGCGGGGAACAGCAGCGCGTCGCCTTGGCGAGGTCGCTGGTGCGCGAGCCCAAGCTGCTGTTGGCCGATGAA
CCTTTCGGTGCGCTGGATGCCCTCACCCGGTTGAAAATGCACGCACTCCTGAAGGACCTGGTCGCCGCGCACCGCCCGGC
GGTCCTGCTCGTAACCCACGACGTCGACGAAGCCATCACCTTGGCCGACCGCGTCATCGTCCTCCAAGGCGGCCGTGTAG
CCCTTGAGCGCAAGGCTGGAACCGCCGTCGACCATTCAGCGCTGAGGGGCGAACTGCTCGAAGCCCTCGGCGTCCATTCT
GCTGCCTAA

Protein sequence : 
MATHTGGLSTLRTGPSYEVSVRNLIRSFGPKGVLNGVDLDIAPGEFVALLGPSGCGKSTLLRALAGLDGDVRGSGVVKVP
EQVSVVFQDSRLLPWDTVLGNVTLGLRDHDADARGRRALAEVGLAGREKAWPHELSGGEQQRVALARSLVREPKLLLADE
PFGALDALTRLKMHALLKDLVAAHRPAVLLVTHDVDEAITLADRVIVLQGGRVALERKAGTAVDHSALRGELLEALGVHS
AA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-31 52
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_006661311.1 aliphatic sulfonates transporter ATP-binding protein SsuB NC_008702.1.4606598. Protein 2e-14 42