Gene Information

Name : BPC006_II2986 (BPC006_II2986)
Accession : YP_006659832.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : sigma-54 interaction domain/Fis family transcriptional regulator domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3004574 - 3005542 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGCAACACAGCAGTGACGGCAGACGGCTGCACGGCAATTCGTGTCTGATCCAGGCGCTGTTGCACAAGATCGAAAA
AGTGGCCGCGACTCGTGCAAGCGTGTTGATCGTCGGCGAAAGCGGGGTCGGCAAAGATATCGTCGCAAGACTCCTCCATG
ACATGAGCCCACGCCGCCGTGGCCCGTTCGTTCCGGTCAATTGCGGCGCGATTCCGGCCGACATCGCCGAATCGCAGTTG
TTCGGCCACGAGAAGGGCAGCTTCACCGGCGCGGCCGCGCAGCACATCGGCTTCTTCGAGGCCGCGCGCGGCGGCACGAT
CTTCCTCGACGAAGTGGCCGAGATGTCGCGCGATCTGCAGGTGAAGCTGCTGCGCGCGCTCGAATCGAACACCATCACGC
GCGTGGGCGGCAGCGAGCCGATCGCGCTCGACGTGCGCGTGGTCGCGGCCACTCACCACAACCCTGCCGAGGCGGTGCAG
GAAGGGCGCTTTCGCGAAGACCTGTTCTACCGGCTCGCCGTGTTCGCGCTGCGCGTGCCGGCGCTCAGGCATCGCGAGGA
CGATATCGAGGGCATCGCGCAGGAGCTCGTCGATACGCTCAACAGCCGGCACAGCACGCGCAAGCGGCTCTCGGGGCAGG
CGCTGAAGACGCTGCGCACCTATTCGTGGCCGGGCAACGTGCGCGAGCTGCGCAATGCGATCGAGCGCGCGTACATCCTC
TCCGACGAGCAGATCGAGCAGTTGCCGGTGCGACGGCTCGCGCCGCGCGACGACGTGCGCCGGAACGCGATGACGCTGCC
GCTCGGCATGACGCTCGCGCATTCGCAGCAGCGCTTCATCGCCGCGTCGCTCAAATACTTCGACGGCGACAAGCCGCGCA
CCGCGAAGGCGCTCGGCATCAGCCTGAAGACACTGTACAACCGGCTCGCGCTGATGCGCGAGCACGACGGGGAAACCGCG
CAACACTAA

Protein sequence : 
MSQHSSDGRRLHGNSCLIQALLHKIEKVAATRASVLIVGESGVGKDIVARLLHDMSPRRRGPFVPVNCGAIPADIAESQL
FGHEKGSFTGAAAQHIGFFEAARGGTIFLDEVAEMSRDLQVKLLRALESNTITRVGGSEPIALDVRVVAATHHNPAEAVQ
EGRFREDLFYRLAVFALRVPALRHREDDIEGIAQELVDTLNSRHSTRKRLSGQALKTLRTYSWPGNVRELRNAIERAYIL
SDEQIEQLPVRRLAPRDDVRRNAMTLPLGMTLAHSQQRFIAASLKYFDGDKPRTAKALGISLKTLYNRLALMREHDGETA
QH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpR NP_791206.1 type III transcriptional regulator HrpR Virulence Hrp PAI Protein 6e-41 41
hrpR AAC34752.1 HrpR Virulence Hrp PAI Protein 4e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2986 YP_006659832.1 sigma-54 interaction domain/Fis family transcriptional regulator domain-containing protein VFG1214 Protein 1e-57 43