Gene Information

Name : BPC006_II2676 (BPC006_II2676)
Accession : YP_006659524.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2705838 - 2706530 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGTCCTTATCGTAGAAGACGAGCCGAAGACGGGCATGTATTTGAAGCGCGGGCTCACCGAAGCGGGCTTCGTCTG
CGACTGGACACAGGACGGCATCAGCGGTCTGCATCAGTTGCAGACGGAGAACTACGATCTCGCGATCCTCGACGTGATGC
TGCCCGGTTGCGACGGCTGGACAGTCGTGCGCGAGCTGCGCAGAACGCACCGCACGCCGGTGCTGTTCCTCACCGCGCGC
GATCACGTCGACGATCGCGTGAAAGGCCTCGAGCTCGGCGGCGACGACTATCTCGCGAAGCCGTTCGATTTCGCCGAATT
GCTCGCGCGTGTGCGCTCGCTGCTGCGGCGCGGCCAGGCAACCGATGCGCCGGTGCTGCGCGTCGCCAATCTCGAGCTCG
ATCTCATCCAGCGCAAGGCGCGCCGCCAGGGCAACACGATCCTGCTCACCGCGAAGGAATTCCTGCTGCTGTGGCTGCTG
ATGCGCCGGCAAGGCGAGATCCTGCCGCGCTCGCTGATCGCATCGCAGATCTGGGACATCAACTTCGACAGCGATTCGAA
CGTCGTCGACGCGGCGATCAAGCGCGTGCGCGCGAAGGTCGATCAGGACTACGAGCCCAAGCTGATCCACACGGTGCGTG
GAATGGGATACGTTCTCGAGCAGCGGGGCGAGCCGTGCGAATCGTGTGCATGA

Protein sequence : 
MKVLIVEDEPKTGMYLKRGLTEAGFVCDWTQDGISGLHQLQTENYDLAILDVMLPGCDGWTVVRELRRTHRTPVLFLTAR
DHVDDRVKGLELGGDDYLAKPFDFAELLARVRSLLRRGQATDAPVLRVANLELDLIQRKARRQGNTILLTAKEFLLLWLL
MRRQGEILPRSLIASQIWDINFDSDSNVVDAAIKRVRAKVDQDYEPKLIHTVRGMGYVLEQRGEPCESCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-57 58
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-56 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0197 Protein 3e-86 74
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0083 Protein 5e-66 62
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0111 Protein 1e-65 61
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0125 Protein 1e-64 59
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0638 Protein 2e-59 59
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0308 Protein 2e-62 58
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator BAC0347 Protein 2e-60 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator VFG0596 Protein 1e-57 58
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator VFG1390 Protein 2e-38 42
BPC006_II2676 YP_006659524.1 DNA-binding heavy metal response regulator VFG1389 Protein 7e-32 42