|
Name : BPC006_II2067 (BPC006_II2067) Accession : YP_006658916.1 Strain : Genome accession: NC_018529 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 2102016 - 2104088 bp Length : 2073 bp Strand : - Note : - DNA sequence : ATGCTGAAGAATCTCCTGATCAAGGCCCAAGCGCGCCCCGAACTGATCGTCCTGTGCCTGATGGTGCTCGTGATCGCGAT GCTGATCGTGCCGCTGCCGCCGTACGTGCTCGATTTCCTGATCGGCCTGAACATCGTGACGGCGCTGCTCGTGTTCATGG GTTCGTTCTACATCGTCAACATCCTCGAGTTCTCGACGTTTCCGCCGATCCTGCTGATCACGACGCTGTTCCGGCTCGCG CTGTCGATCAGCACGAGCCGGATGATCCTGCTCACCGCCGAGGGCGGCAAGATCATCACGACGTTCGGGCAGTTCGTGAT CGGCGATAACCTCGTGGTCGGCTTCGTCGTGTTCGTGATCGTGACGATCGTGCAGTTCATCGTGATCACGAAGGGCTCGG AGCGCGTCGCCGAAGTCGCGGCGCGCTTCTCGCTCGACGCGATGCCCGGCAAGCAGATGAGCATCGACGCGGACCTGCGC GCCGGCATCATCGACAACGAAGGCGTGAAGGCGCGCCGCTCGGCGCTCGAGCGTGAAAGCCAGCTGTACGGCTCGTTCGA CGGCGCGATGAAGTTCATCAAGGGCGATGCGATCGCCGGCATCGTCGTCATCTTCGTGAACCTGATCGGCGGCATCTCGG TCGGCGTGATGCAGCACGGCATGTCGGTGTCCGACGCGCTCACGACCTACACGATCCTGTCGATCGGCGACGGCCTCGTC GCGCAGATCCCGGCGCTCCTGATCGCGATCGGCGCGGGCTTCGTCGTCACCCGCGTGGGCGGCTCGGGCAACAACCTCGG CGCGAACATCGTCGGCGAGCTGTTCTCGAACCCGTTCGTGCTCGTCGTCACGGCCGTGCTCGCGCTCGCGATCGGCCTGC TGCCCGGCTTTCCGCTGATCGTCTTTCTGCTGATCGCGCTCGCGCTCGGCGCGCTGTACGTGCGCCGCGAATGGCGCAAG CCGGGCGAGCCGGCGCGCGAGGGCGGGCTCGTCGGCAAGGTCGCGGGCGCGCTCTCGGGCGGCGGCGCGGCGAAAGCGGC CGACGGCGGCGCCGGCGATGTCGACATCGACAAGCTGATTCCGGAGACGGTGCCGCTGATGCTGATAGTGCCCGAGGCGG CGCAGCCGATGTTCGAGCAGGAAGGCGTGATCGGCGCGTTCCGGCGGCGCGCGTTCGTCGACATGGGGCTGCGCCTGCCC GACATCCGCGTCGTGTATTCGCCGCAGGTGCATCCGCGCGAGGCGATCGTGCTGATCAACGAGATCCGCGCGGCGACGTT CGCGATCTGCTTCGACCGGCACCGCGTGGTCGGCTCGACGCTCGCGCTCGAAGGGCTGCCCGTCGACGTCGTGACGCTGC CGGACGGCGCGGGCGGCGACGCGTGGTGGGTGCCGGGCGCGCAGACCGACGCGCTCGCGAAGATCGACGTGCTCACGCGC TCGGCGATCGACGATCTGTACGGGCAGTTTCTCGCGGTGATGCTCGCCAACGTATCGGAATTCTTCGGCGTGCAGGAAGC CAAGCGCCTGCTCGACGACATGGACCAGAAGTACCCGGAGCTCATCAAGGAGAGCTATCGGCACATTTCGGTGCAGCGCA TCGCGGAGGTGTTCCAGCGCCTGCTCGCCGAGAAGATCTCGATTCGCAACATGAAGCTGATTCTCGAATCGCTCGCGCAA TGGGGGCCGAAGGAGAAGGATTCGATCCTGCTCGTCGAGCACGTGCGCGCGGCGCTCGCGCGCTACATCTCGAACCGCTT CGCCGCGGGCGGCAAGCTGCGCGCGCTCGTGCTGTCGGCGCAGTTCGAGGACGCGGTGGGCAAGGGCGTGCGGCAGACCT CGGGCGGCGCGTATCTGAACCTGGAGCCCGCGACGAGCGAGCAACTGCTCGACCGGCTCGCGCTCGAGCTCGCGCGCGCG GGCTTCTCGCAGCGCGACATGGTGCTGCTTGCCTCGATGGAAGTCAGGCGTTTCGTCAAGCGGCTGATCGAGAGCCGCTT TCCGGAACTGGAGGTGCTGTCGTTCGGCGAAGTGGCCGACAGCGTCGCAATCGATGTGTTGAAGACGATCTAA Protein sequence : MLKNLLIKAQARPELIVLCLMVLVIAMLIVPLPPYVLDFLIGLNIVTALLVFMGSFYIVNILEFSTFPPILLITTLFRLA LSISTSRMILLTAEGGKIITTFGQFVIGDNLVVGFVVFVIVTIVQFIVITKGSERVAEVAARFSLDAMPGKQMSIDADLR AGIIDNEGVKARRSALERESQLYGSFDGAMKFIKGDAIAGIVVIFVNLIGGISVGVMQHGMSVSDALTTYTILSIGDGLV AQIPALLIAIGAGFVVTRVGGSGNNLGANIVGELFSNPFVLVVTAVLALAIGLLPGFPLIVFLLIALALGALYVRREWRK PGEPAREGGLVGKVAGALSGGGAAKAADGGAGDVDIDKLIPETVPLMLIVPEAAQPMFEQEGVIGAFRRRAFVDMGLRLP DIRVVYSPQVHPREAIVLINEIRAATFAICFDRHRVVGSTLALEGLPVDVVTLPDGAGGDAWWVPGAQTDALAKIDVLTR SAIDDLYGQFLAVMLANVSEFFGVQEAKRLLDDMDQKYPELIKESYRHISVQRIAEVFQRLLAEKISIRNMKLILESLAQ WGPKEKDSILLVEHVRAALARYISNRFAAGGKLRALVLSAQFEDAVGKGVRQTSGGAYLNLEPATSEQLLDRLALELARA GFSQRDMVLLASMEVRRFVKRLIESRFPELEVLSFGEVADSVAIDVLKTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaV | AAS66840.1 | YsaV | Not tested | SSR-1 | Protein | 3e-165 | 56 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 3e-166 | 56 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 3e-166 | 56 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 3e-166 | 56 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 3e-166 | 56 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 2e-150 | 54 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 3e-155 | 53 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-112 | 42 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-96 | 41 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-96 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG2461 | Protein | 0.0 | 99 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG0557 | Protein | 1e-166 | 56 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG1006 | Protein | 7e-167 | 56 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG1780 | Protein | 5e-171 | 55 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG0198 | Protein | 7e-107 | 42 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG0384 | Protein | 2e-114 | 42 |
| BPC006_II2067 | YP_006658916.1 | HrcV family type III secretion protein | VFG0064 | Protein | 9e-111 | 42 |
