|
Name : BPC006_II2060 (BPC006_II2060) Accession : YP_006658909.1 Strain : Genome accession: NC_018529 Putative virulence/resistance : Virulence Product : HrpO family type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 2096661 - 2096954 bp Length : 294 bp Strand : - Note : - DNA sequence : ATGACCGCGCCGACGCGCGCTTTTTTAGGAAGACAAACGATGGCTGAACTCACCTACGCGGGCGACAAGGCAATCCTGCT CGTGATCCTGCTGTGCGCGGCGCCCGTCGCGGTCGCGACCGTCGTGGGCCTCGCGATCGGCCTGTTCCAGACGGTCACGC AATTGCAGGAGCAGACGCTGCCGTTCGGCCTGAAGATGCTCGCGGTGTTCGGTTGCCTGATGATGCTCTCCGGCTGGTTC GGCGGCAAGCTGCTCGCGTTCGCGACCGAGATGCTGTCGATCGGGCTGCGCTGA Protein sequence : MTAPTRAFLGRQTMAELTYAGDKAILLVILLCAAPVAVATVVGLAIGLFQTVTQLQEQTLPFGLKMLAVFGCLMMLSGWF GGKLLAFATEMLSIGLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 5e-22 | 65 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 6e-19 | 57 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 7e-18 | 55 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-18 | 55 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 7e-18 | 55 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 7e-18 | 55 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 4e-19 | 55 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 3e-19 | 55 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-10 | 47 |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-09 | 43 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-09 | 43 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 8e-08 | 43 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 8e-08 | 43 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-05 | 43 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 3e-05 | 43 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 5e-08 | 42 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-08 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPC006_II2060 | YP_006658909.1 | HrpO family type III secretion protein | VFG2454 | Protein | 8e-34 | 100 |
| BPC006_II2060 | YP_006658909.1 | HrpO family type III secretion protein | VFG1772 | Protein | 2e-23 | 65 |
| BPC006_II2060 | YP_006658909.1 | HrpO family type III secretion protein | VFG0550 | Protein | 2e-18 | 55 |
| BPC006_II2060 | YP_006658909.1 | HrpO family type III secretion protein | VFG1013 | Protein | 5e-17 | 54 |
| BPC006_II2060 | YP_006658909.1 | HrpO family type III secretion protein | VFG0187 | Protein | 2e-04 | 42 |
