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Name : BPC006_II2059 (BPC006_II2059) Accession : YP_006658908.1 Strain : Genome accession: NC_018529 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : - COG ID : - EC number : - Position : 2095872 - 2096642 bp Length : 771 bp Strand : - Note : - DNA sequence : ATGCCGAGCGACACGATGGATGTCTTGATGCAAGCGTTCTACCGGCACGCCGGCGCGATCGCGATCGCGTACGCGCGCGT CGCGCCGGTGTTCTATCTGCTGCCGTTCCTGAACGACCGGACGATCGTCAACGGCATCGTGAAGAACACGATCGTGTTCG CGATCATCCTCGGGCTGTGGCCGAGCTTCGCGCATCCGCCGCTGCAAGGCGGCGCGCTCGCCGGCGTCGCGCTGACGGAG GCGGCCGCGGGCGTCGTGCTCGGCGTCGCGCTGTCGCTGCCGTTCTGGGTCGCGACGGCGGTGGGCGAGCTGATCGACAA CCAGCGCGGCGCGACGATCAGCGATTCGATCGACCCGGCGACGGGCGTCGAAGCGTCGGCGCTCGCGCCGTTCGTGAGCC TGTTCTATGCGGCCGCGTTCCTGCAGCAGGGCGGCATGCTGACGATCGTCGGCGCGCTCGAGGCGAGCTACGCGACGGTG CCCGCCGGCGCGCTGTTCTCGGTCGATCTGCCGCGCATCGGCGCGCTGTTGACCGATCTCGTCGCGCACGGGCTCGCGCT CGCCGCGCCCGTGCTGATCGTGATGTTCGTCACCGATGCGCTGCTCGGGCTGTTCTCGCGCTTCTGCCCGCAGGTCAACG CGTTCTCGCTGTCGCTGACGGTCAAGAGCATCGTCGCGTTCGCCGTGTTTCACCTGTACTTCGTATACGCGGCGCCGCAC GAGCTGACGGCGCTGCTGCGCGTGCATCCTTTCAGCAGCCTGGTGAAGTGA Protein sequence : MPSDTMDVLMQAFYRHAGAIAIAYARVAPVFYLLPFLNDRTIVNGIVKNTIVFAIILGLWPSFAHPPLQGGALAGVALTE AAAGVVLGVALSLPFWVATAVGELIDNQRGATISDSIDPATGVEASALAPFVSLFYAAAFLQQGGMLTIVGALEASYATV PAGALFSVDLPRIGALLTDLVAHGLALAAPVLIVMFVTDALLGLFSRFCPQVNAFSLSLTVKSIVAFAVFHLYFVYAAPH ELTALLRVHPFSSLVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 2e-21 | 44 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 9e-24 | 44 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 6e-24 | 43 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 6e-24 | 43 |
| ysaT | AAS66848.1 | YsaT | Not tested | SSR-1 | Protein | 4e-36 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPC006_II2059 | YP_006658908.1 | type III secretion protein SpaR/YscT/HrcT | VFG2453 | Protein | 7e-91 | 99 |
| BPC006_II2059 | YP_006658908.1 | type III secretion protein SpaR/YscT/HrcT | VFG1771 | Protein | 6e-36 | 47 |
| BPC006_II2059 | YP_006658908.1 | type III secretion protein SpaR/YscT/HrcT | VFG0549 | Protein | 4e-24 | 44 |
