Gene Information

Name : BPC006_II2058 (BPC006_II2058)
Accession : YP_006658907.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2094633 - 2095868 bp
Length : 1236 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGAGAAAACCGAGAAGCCGACCGCGAAGAAGCTGCGCGACGCGGCGAAGAAGGGGCAGACGTTCAAGGCGCGGGA
CATCGTCGCGCTCATCGTGATCGCCACGGGCGCGCTGGCCGCGCCCGCGCTCGTCGATCTGACGCGCATCGCGGCCGAAT
TCGTGCGGATCGCGTCGACGGGCGCGCAGCCGAACCCGGGTGCGTACGCATTCGCGTGGGCGAAGCTGTTCCTGCGCATC
GCCGCGCCGTTCGTGCTGCTCTGCGCGGCGGCGGGCGCGCTGCCGTCGCTTGTGCAAAGCCGCTTCACGCTCGCGGTCGA
ATCGATCCGCTTCGATCTCACCGCGCTCGATCCGGTCAAGGGAATGAAGCGGCTCTTCAGCTGGCGCTCGGCGAAGGACG
CGGTGAAGGCGCTGCTCTATGTCGGCGTGTTCGCGCTCACGGTGCGCGTGTTCGCCGATCTCTACCACGCCGACGTGTTC
GGGCTGTTCCGCGCGCGCCCGGCGCTGCTCGGCCACATGTGGATCGTGCTCACGGTGCGCCTCGTGCTGCTGTTCCTGCT
GTGCGCACTGCCCGTGCTGATCCTCGACGCCGCCGTCGAATACTTCCTGTACCACCGCGAACTGAAGATGGACAAGCACG
AGGTGAAGCAGGAATACAAGGAGAGCGAGGGCAATCACGAGATCAAGAGCAAGCGGCGCGAGATTCATCAGGAACTGCTG
TCGGAGGAGATCAAGGCGAACGTCGAGCAGTCCGATTTCATCGTCGCGAACCCGACCCACATCGCGATCGGCGTCTACGT
GAATCCGGACATCGTGCCGATTCCGTTCGTGTCGGTGCGCGAGACCAACGCACGCGCGCTCGCCGTCATTCGGCATGCCG
AAGCGTGCGGCGTGCCCGTCGTGCGCAACGTCGCGCTCGCGCGCTCGATCTATCGCAACTCGCCGCGCCGCTACAGCTTC
GTGAGCCACGACGACATCGACGGCGTGATGCGCGTGCTGATCTGGCTCGGCGAGGTCGAGGCGGCCAATCGCGGCGGGCC
GCCGCCCGAGACGCGCGCGCCGACTTCGGCCGAGCCGCAAGCGCGCGACGGCGTGGCCCCGCCGGGCGACGCCTGCGCGG
ACAACGCCTTTCCCGACGACGCCCCACCGGGCGCCGCCGCGCCGAACGCCGGTTCGCCGGACAGCCCGGCGCCGGACGGC
GGCGCGCCGGCCCGAACGGGCGATCAAAACGCTTGA

Protein sequence :
MAEKTEKPTAKKLRDAAKKGQTFKARDIVALIVIATGALAAPALVDLTRIAAEFVRIASTGAQPNPGAYAFAWAKLFLRI
AAPFVLLCAAAGALPSLVQSRFTLAVESIRFDLTALDPVKGMKRLFSWRSAKDAVKALLYVGVFALTVRVFADLYHADVF
GLFRARPALLGHMWIVLTVRLVLLFLLCALPVLILDAAVEYFLYHRELKMDKHEVKQEYKESEGNHEIKSKRREIHQELL
SEEIKANVEQSDFIVANPTHIAIGVYVNPDIVPIPFVSVRETNARALAVIRHAEACGVPVVRNVALARSIYRNSPRRYSF
VSHDDIDGVMRVLIWLGEVEAANRGGPPPETRAPTSAEPQARDGVAPPGDACADNAFPDDAPPGAAAPNAGSPDSPAPDG
GAPARTGDQNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaS YP_217806.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 9e-63 46
spaS NP_461808.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 8e-64 46
spaS NP_457281.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 7e-64 46
spaS NP_806490.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 7e-64 46
spaS AAS66868.1 SpaS Not tested SSR-2 Protein 4e-55 44
ECs3721 NP_311748.1 surface presentation of antigens protein SpaS Not tested LIM Protein 2e-62 43
ysaU AAS66849.1 YsaU Not tested SSR-1 Protein 5e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_II2058 YP_006658907.1 surface presentation of antigens protein SpaS VFG2452 Protein 3e-161 100
BPC006_II2058 YP_006658907.1 surface presentation of antigens protein SpaS VFG0548 Protein 4e-64 46
BPC006_II2058 YP_006658907.1 surface presentation of antigens protein SpaS VFG1770 Protein 2e-58 42
BPC006_II2058 YP_006658907.1 surface presentation of antigens protein SpaS VFG1015 Protein 5e-58 41