Gene Information

Name : BPC006_II1876 (BPC006_II1876)
Accession : YP_006658726.1
Strain :
Genome accession: NC_018529
Putative virulence/resistance : Virulence
Product : type III secretion protein SpaR/YscT/HrcT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1914897 - 1915715 bp
Length : 819 bp
Strand : -
Note : -

DNA sequence : 
TTGACGCCTGCGCTTTTTGCTTTGCAGGGTTGGGCCGGCGCGCTGCTCGATGATGTCACGCTGCTCGCCATCTGCTCGGT
TCGCCTCTATATCGTGATGTCCGTTTTCCCGCCGACGGCTGACGGGCTGTCGCAAGGCGTCGTGCGCAATGCGCTCGTGA
TCTTGTTCGGTTCGTACGTCGCGTACGGACAACCGGCGGGGTTCGTGCAGACGCTGCACGGCACGCCGCTGATCGTGACC
GGCTTGCGAGAGGCCGTGATCGGCGTCGTCCTCGGTATTGCCGCGTCCACGGTGTTCTGGGCGATCGAAGGCGCAGGTTG
TTATATCGACGATCTGACGGGATACAACAACGTGCAGATGACGAATCCCGCGCGTGGGGAGCAGTCGACGCCGACGGCGA
CGCTGCTCACGCAGGTCGCGACGGTCGCGTTCTGGACGTTCGGGGGAATGACCTTCCTGCTCGGTACGCTATACGAATCG
TATCGATGGTGGCCGATCACGCTGACCTTCCCCCGGATGCCGGCATTGATCGAGGCGTTCGCCGTGAGTCAGACCGACAG
CTTGATGCAAATGGTCACGAAGCTCGCCGCGCCGATGATGCTGGTTCTTCTGCTGATCGATTTCGCCTTCGGATTCGCCG
CGAAGTCTGCTTCGAAGCTCGATCTCATGGGGTTGAGTCAGCCTGTCAAGGGCGCGGTGACGGTGCTGATGCTCGCATTG
TTCGTCGGTACGTTCGTCGATCAAGCGCGCGAGCAGGTGACGCTGTCGACGCTATCGAAACAGCTGCGCGAGTGGTCGCA
CGCCATGTCGCGCGGCTGA

Protein sequence : 
MTPALFALQGWAGALLDDVTLLAICSVRLYIVMSVFPPTADGLSQGVVRNALVILFGSYVAYGQPAGFVQTLHGTPLIVT
GLREAVIGVVLGIAASTVFWAIEGAGCYIDDLTGYNNVQMTNPARGEQSTPTATLLTQVATVAFWTFGGMTFLLGTLYES
YRWWPITLTFPRMPALIEAFAVSQTDSLMQMVTKLAAPMMLVLLLIDFAFGFAAKSASKLDLMGLSQPVKGAVTVLMLAL
FVGTFVDQAREQVTLSTLSKQLREWSHAMSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 3e-38 47
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 3e-38 47
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 4e-38 47
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 2e-38 45
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 1e-38 45
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 1e-38 45
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 2e-38 45
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 3e-38 45
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 4e-38 45