Gene Information

Name : R0052_05685 (R0052_05685)
Accession : YP_006655798.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 996557 - 996733 bp
Length : 177 bp
Strand : -
Note : COG1476 Predicted transcriptional regulators

DNA sequence :
ATGACGCAAAGAGAAGTTGCTGAAAAAGTTCGCGTGACGGAACGAACAATCATTTCAGTTGAAAAAGGGAAGTATAAGCC
ATCTATTGTTTTAGCTTATAAGCTAGCTAAACTTTTTGGGACAGATATTGAAACCTTATTTTGCTTAGAGGAGTTTGTTG
AAAATGAAGAAGAATGA

Protein sequence :
MTQREVAEKVRVTERTIISVEKGKYKPSIVLAYKLAKLFGTDIETLFCLEEFVENEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 0.022 41
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 0.032 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R0052_05685 YP_006655798.1 transcriptional regulator VFG2168 Protein 0.009 41
R0052_05685 YP_006655798.1 transcriptional regulator VFG2175 Protein 0.009 41