Gene Information

Name : R0052_05440 (R0052_05440)
Accession : YP_006655760.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Resistance
Product : Stress induced DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 965530 - 965997 bp
Length : 468 bp
Strand : -
Note : COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)

DNA sequence :
ATGCAATATCAAAAGACCAAAGAAATTTTAAATCAAGCAGTTGCTGATCTTAGTCAATTACAAATGGTAGTACGTCAACA
ACACTGGTACATGCGTGGACCAGAATTTTTAAACTTACACCCATACTTAGATGATGTAATGTCTGAATTAGACGATCAAC
GTGATTTGATCGCTGAAAGATTAATTACTATTGATGGCTCTCCATACTCTAGCTTGGCAGAAATGGTAGATCATTCAACC
ATTGAAGCTCATCCTGGCAAGTGGGGTACACCTACTACTGAGCGTTTTGCTACTATCGTTGATGGTTATCATCACTTGGC
ACACCTTTACGAAAAAGGTATCAAAGCTGCAGATGAAGAAGGAGACTACAGTTCAAGTGATATCTTAACTACTTGTCACA
ATGATCTTGAAAAGAGAATTTGGATGATGGCAGCTGAGATTAATCAAGCACCTAACATTGACGAATAA

Protein sequence :
MQYQKTKEILNQAVADLSQLQMVVRQQHWYMRGPEFLNLHPYLDDVMSELDDQRDLIAERLITIDGSPYSSLAEMVDHST
IEAHPGKWGTPTTERFATIVDGYHHLAHLYEKGIKAADEEGDYSSSDILTTCHNDLEKRIWMMAAEINQAPNIDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 7e-32 46
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 5e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R0052_05440 YP_006655760.1 Stress induced DNA-binding protein BAC0134 Protein 5e-27 42