Gene Information

Name : R0052_05380 (R0052_05380)
Accession : YP_006655752.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 953317 - 954075 bp
Length : 759 bp
Strand : +
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGATCCCCAAGGTAGAGGCCTATCACAAGCGTAAGCTTAGCGATAAGTTCTTCTGCGTTTATCTAGACGCTACCTACGT
TCCTCTGCGCCGAGAAACTTTTGAACGTGAAGCTGTCTATATTGCCATTGGCATCAAACCTAATGGCCAAAAGGAAGTTA
TCGACTACTGCATTGCGCCCAATGAAAACATTGAAGTCTGGACGGAGTTGCTTCAAAATATGAAAAGCAGAGGCCTTAAA
CAAGTTGAATTATTTTTATCAGATGGTGTTGTGGGTATGAAAACTGCACTAATGCAAACTTATCCTAAAGCTCATTTCCA
GCGTTGCTTGGTTCATGTCATGCGTAATATCTGCGCTAAAGTACGCGTGGAGGATCGCGAGGCAATTATGAACGAATTCA
AGCAGATTCACCAGCAAGCCAATAAAGCAGCTGCTGTTGATGTATTGCATGCCTTCTATGCCAAATGGGACAAGAGTTAT
AATCATGTCATAAGAAACCTGAAAGACATCGAGCCGGACCTGCTGGTCTTCTATAATTATCCTAAGCAGATCAGAGCTTC
AATTTACTCTACCAACATGATTGAATCTTTTAACAGCGTCATTAAGCGCAAGGCTAAGCCTAAAGCAGAGTTTCCGACTG
AACAGTCGCTTGATACTTTTATTGGCATTCAAGCAATGAGTTACAATGACCGCTACTTCAACCGAATTCACAAAGGCTTT
GGTCAGGTTCAGGACACCTTAGAATCTTACTTTGATTAA

Protein sequence :
MIPKVEAYHKRKLSDKFFCVYLDATYVPLRRETFEREAVYIAIGIKPNGQKEVIDYCIAPNENIEVWTELLQNMKSRGLK
QVELFLSDGVVGMKTALMQTYPKAHFQRCLVHVMRNICAKVRVEDREAIMNEFKQIHQQANKAAAVDVLHAFYAKWDKSY
NHVIRNLKDIEPDLLVFYNYPKQIRASIYSTNMIESFNSVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNDRYFNRIHKGF
GQVQDTLESYFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0035 AAM75241.1 EF0035 Not tested Not named Protein 1e-52 50