Gene Information

Name : R0052_04920 (R0052_04920)
Accession : YP_006655675.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.1.3.3
Position : 867697 - 868737 bp
Length : 1041 bp
Strand : +
Note : COG0078 Ornithine carbamoyltransferase

DNA sequence : 
ATGAAATATTTACAAAATGTGTTTCAAGGCAGAAGTTTATTAAAATGCAAAGACTATACTCCAGCGGAGCTTAACTATCT
AATTGATTTCGCACTTCATTTGAAGGAACTAAAGAAAGAAAATATTCCGCATGAATATTTAAAAGGAAAGAATATAGCTC
TTTTATTTGAAAAATCTTCAACAAGAACACGTTCAGCCTTTGTAGTTGCATGCAATGATTTAGGCGCAAATCCTGAATAT
ATGGGTGCTGGTGAAATTCATTTAGGTAAAAAGGAAAGTATTGAAGATACTGCAAAGGTTTTGGGCAGTATGTTTGACGG
CATTGAATATCGCGGTTTTGCTCAAAAAGATGTAGAAGATTTGGCTAAATATTCTGGTGTCCCTGTTTGGAATGGTTTAA
CAGATAAATGGCATCCGACCCAAATGTTGGCTGACTTTATGACTATTAAAGAAAAGTTTGGACATTTAAAGGGACTTACT
TTAGCTTATGTAGGCGATGGACGTGATAATGTTGCCAACAGTCTTTTAGTGGCTGGCAGCATGCTTGGAGTTAATGTACA
CATAGTTACGCCAAAGCCTTTATTCACTCACCCTGATGTACAAAAAATTGCAGAAGGTTTTGCCAAAGATTCTGGATCAA
GAAATTTGATTACTGATGACATTGAACAAGGCGTTAAAGGTGCAAATATTATTTATACTGATGTCTGGGTATCAATGGGT
GAAAATGACTGGAGTGAGAGAATCAAATTGTTAAAGCCTTACACGGTTACAATGAAGATGATGTATATGACAGGCACCCC
GGATGATCAACTAATCTTTATGCACTGTTTGCCTGCGTTTCATGATCGCACTACTAAAGTTGGCGAAGAAATTTATGAAA
AATATGGTCTAAGTGAAATGGAAGTTACAGATGAAGTCTTTAACTCTCAATACGCTTGGCAATTTACTGAAGCGGAAAAT
AGATTGCATTCTATCAAAGCAATAATGGCCGCTACTTTGGGCAATTTGTTTATTCCGTCAGTTGATGAAGGAAGTAAATA
A

Protein sequence : 
MKYLQNVFQGRSLLKCKDYTPAELNYLIDFALHLKELKKENIPHEYLKGKNIALLFEKSSTRTRSAFVVACNDLGANPEY
MGAGEIHLGKKESIEDTAKVLGSMFDGIEYRGFAQKDVEDLAKYSGVPVWNGLTDKWHPTQMLADFMTIKEKFGHLKGLT
LAYVGDGRDNVANSLLVAGSMLGVNVHIVTPKPLFTHPDVQKIAEGFAKDSGSRNLITDDIEQGVKGANIIYTDVWVSMG
ENDWSERIKLLKPYTVTMKMMYMTGTPDDQLIFMHCLPAFHDRTTKVGEEIYEKYGLSEMEVTDEVFNSQYAWQFTEAEN
RLHSIKAIMAATLGNLFIPSVDEGSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-83 55
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-83 55
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-81 55
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-83 54
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-82 54
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-82 54
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-82 54