Gene Information

Name : R0052_00230 (R0052_00230)
Accession : YP_006654891.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 38000 - 38200 bp
Length : 201 bp
Strand : -
Note : COG1476 Predicted transcriptional regulators

DNA sequence :
ATGAATCACGTAAGAGAATATCGTAAACAAAAAAAGATTTCACAAATGGAACTTGCTAAAAGAATAGGCGTAGCCAGGCA
GACTATTAATCTAATTGAAAACGATAAATATAATCCTTCACTTGAATTATGTTTAAGCTTAGCACATGTATTAGGCACAG
ATTTGAATAGTTTATTTTGGGATGGGGATGAACAACAATGA

Protein sequence :
MNHVREYRKQKKISQMELAKRIGVARQTINLIENDKYNPSLELCLSLAHVLGTDLNSLFWDGDEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 56
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R0052_00230 YP_006654891.1 transcriptional regulator VFG2168 Protein 8e-09 50
R0052_00230 YP_006654891.1 transcriptional regulator VFG2175 Protein 8e-09 50