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Name : R0052_01545 (R0052_01545) Accession : YP_006655125.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 282484 - 284964 bp Length : 2481 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGAAAATTCATATAGTAAAAGCGTTAATCAAGTGTTAGAAATTGCGCGTGAACAAGCACAGGAGTTTCATCATCGGCT AATTGGTACTGAGCATGTGTTATTGGCTATGGTGATTGAAACTGAAGGTGAAGCAGGAAAAATCTTGCGCTCATGGGGAT TGACGCCAACTGCCGTACGAGAAGAGATTGAACGTTACACAGGCTATGGCTCAGCAGCTAAGTCAAGCTACATGGAAATG TCACCTCGTTTAAGCTTAGCGTTAGATTATGCCAAAAGACAGGCTGACCAAGGTGGATATAAAGAAATTGAAACTAATCA TGTTTTGCTAGGAATAACTGCTAGTGAACAGGTTTTGTCAGCCATGATTTTAAAGAACTTAAATGTTGATATTGGCCGTT TGCGTCAAGATGTTAATGACAGCTTGGATCAAGAACAAGACTTTGGCGATTCAGCAAGCTGGTTAGGCAATAGCAATACC GCTACTGGCCAAAAGAAACGTAAAAATAGTACTACACCAACTCTAGATAAAGTAGCGGTTAATTTAAATCAACGCACCCG TGAAGGTGGAATTGATCCAGTTATTGGCCGTGAAAAAGAAATTAAGCGAGTTATTCAAATTTTATCTCGTCGTACTAAGA ACAATCCAATTTTGGTAGGCGAATCTGGTGTAGGTAAAACTGCGGTCGCCGAAGCAATTGCTACAGAAATTGTTAATAAA AAAGTTCCAGAAGGCTTGCTTGATAAGCGAGTAATGGCTCTTAACATGGGCAGTTTAGTAGCAGGCACTAAGTATCGTGG TGAATTTGAAGATAGAATGAAAAAGATTTTGGATGAAATTGCCAAAGACGGTAAAGTCATTCTATTTGTCGATGAAATGC ATACTTTGATTGGTGCTGGTGGTGCTGAAGGGGCAATTGATGCTTCTAATATTTTGAAACCTTCACTTGCGCGCGGCGAT ATTCAAATGATTGGTGCTACTACATTTGATGAATATCAAAAGTACATTGAAAAGGATCAAGCATTGGCTCGTCGTTTCCA ACAAGTACGTTTGAATGAACCTACTAAGAAGGATACGTTAGCTATTTTAAAGGGACTTAGACCTAAGTATGAAAAGTTCC ACCATGTGACTATTTCAGATGCTAGTCTTGAGGATGCTGTTGATTTATCTAGTCGGTACATTACTAATCGGTTCTTGCCA GATAAGGCGATTGATTTGGTAGATGAGGCTAGTGCAGCAGTTAAAATTAGAACTAATGTTGGTTCAAACAAAGATTTGGT TCAAATTAATGAAAAGATAAAGAATATTATTGAACAAAAGAATGAAGCAGCTACGAGTCAGAACTTTGTTAAAGCAGCTC AACTTCAAGAAGCACAAAACAATTTGCAAATGCAGCGAGAAGAAATGGAGAATGCATTGCAAGTTAAGGTTAGTGCTGAG GCTGTTGTTGGCCCCGAAGATATTGCCAAGGTAGTATCTGACTGGACAGGTGTACCTGTTACTCAGATGAAGAGGGATGA AAGTCGCCAATTAGCTAACTTAGAGAGCATTTTGCATAAACGCGTGATTGGGCAAGATAAGGCTGTTTCAGCTGTAGCTC GTGCAATTCGTCGTAGCAGAAGCGGTATTAAGGATGAGCGCCGTCCAATTGGATCATTCTTGTTCTTAGGGCCAACAGGT GTAGGTAAGACTGAATTAGCTAAATCAGTTGCAGCAGCAATGTTTGGGTCAGAAGATAATTTGATCAGATTAGATATGTC TGAATACATGGATCAAATTGCCTCAAGCAAGTTAATTGGCTCAGCTCCTGGTTATGTTGGCTATGAAGAGGGCGGACAAC TTTCTGAACAAGTTCGTCGTCATCCATATTCAGTTGTTTTGCTTGATGAAGTGGAAAAAGCTCATCCTGATGTATTTAAT TTGCTTTTGCAAGTTTTGGATGAAGGATTTTTGACAGATTCTAAAGGCAGAAAAGTCGACTTTAGAAATACAATCATCAT TATGACTTCTAATTTGGGTTCACGTACGTTATTTGACAGCAAGGCTGTAGGTTTCAATGCTGATAGGGTTGACCAAGCTA AAGTAAGACAAGCTAAAGTTCAACAGGCAATTAAGCAATTCTTCCGTCCGGAATTTTTGAACCGAATTGATGAAACGATT ATCTTTGATGAATTAACTAAGAAGCAGTTGCGGGACATTGTAACTTTACTTACTCACAAGTTGGTAGTTCGTTTGCAAAA GAAGGGAATTACGCTTAGGATTTCCCGTGCCGCTTTGGATAAAATTGTTAAAGATGGTTATGACCCTGAAAATGGTGCTC GTCCACTTAGAAGAGCAATCCAAAATGATATCGAAGATAAATTAGCAGAAATGTTGATTACAGGTGAAGTAAAAGCAAAC GACACTTTGAAAATTGGTAGTCAACATGGTCATTTGAAATTTGATGTTGTGCCAGAGAAAAAACTGGTGAAAACTAAGTA A Protein sequence : MENSYSKSVNQVLEIAREQAQEFHHRLIGTEHVLLAMVIETEGEAGKILRSWGLTPTAVREEIERYTGYGSAAKSSYMEM SPRLSLALDYAKRQADQGGYKEIETNHVLLGITASEQVLSAMILKNLNVDIGRLRQDVNDSLDQEQDFGDSASWLGNSNT ATGQKKRKNSTTPTLDKVAVNLNQRTREGGIDPVIGREKEIKRVIQILSRRTKNNPILVGESGVGKTAVAEAIATEIVNK KVPEGLLDKRVMALNMGSLVAGTKYRGEFEDRMKKILDEIAKDGKVILFVDEMHTLIGAGGAEGAIDASNILKPSLARGD IQMIGATTFDEYQKYIEKDQALARRFQQVRLNEPTKKDTLAILKGLRPKYEKFHHVTISDASLEDAVDLSSRYITNRFLP DKAIDLVDEASAAVKIRTNVGSNKDLVQINEKIKNIIEQKNEAATSQNFVKAAQLQEAQNNLQMQREEMENALQVKVSAE AVVGPEDIAKVVSDWTGVPVTQMKRDESRQLANLESILHKRVIGQDKAVSAVARAIRRSRSGIKDERRPIGSFLFLGPTG VGKTELAKSVAAAMFGSEDNLIRLDMSEYMDQIASSKLIGSAPGYVGYEEGGQLSEQVRRHPYSVVLLDEVEKAHPDVFN LLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRTLFDSKAVGFNADRVDQAKVRQAKVQQAIKQFFRPEFLNRIDETI IFDELTKKQLRDIVTLLTHKLVVRLQKKGITLRISRAALDKIVKDGYDPENGARPLRRAIQNDIEDKLAEMLITGEVKAN DTLKIGSQHGHLKFDVVPEKKLVKTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-161 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| R0052_01545 | YP_006655125.1 | ATP-dependent protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 51 |
| R0052_01545 | YP_006655125.1 | ATP-dependent protease ATP-binding subunit ClpC | VFG0080 | Protein | 5e-133 | 49 |
