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Name : lysS (R0052_01530) Accession : YP_006655122.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 279214 - 280764 bp Length : 1551 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : TTGGCAAAGAACGAAATGAATGACCAATTACGTGTTCGTCGTCAAAAGATGGACGAAATGCGTGAAAACGGAATTGAACC ATTCGGTCAAAGAAAGTTTGATCGTCAAGATTTGGCAAGTGCTTTGGAAGAAAAGTATGGTAAAGAAGATGAAGACGAAT TAAACGATGATATGCCTAAGACTAAGATTGCAGGTCGTATGCTTGCAAAACGTGGTAAGGGTAAAGTAGGTTTTGCAGAT CTTTACGACCGTACTGGTAAGATTCAAATTTATGTACGTAAAGACATCGTAGGCGAAGACAACTACAAGATCTTCAAGAA GTCAGATATTGGTGATTTCTTGGGTATTGATGGGGAAGTTATGAAAACCGGTACTGGTGAGTTGACTATTCGTGCTACTC ACGTAACCTTCTTATCTAAGGCTCTTCGTCCTTTGCCAGACAAGTACCACGGCTTGAAGGATGTTGAAGCAATCTACCGT CAACGTTACCTTGACTTGATTACTAATCGCGATAGCTACATGCGTTTTGTTCACCGTACTCAAATTATCCAAGCTATTCG TGATTACTTGAATAAGCAAAACTTCTTGGAAGTTGAAACTCCAGTATTGCACAACATTCCAGGTGGTGCTGAAGCTCGTC CATTTATTACTCACCACAACGCTTTGGATATTGACCTTTACATGAGAATTGCTTTGGAACTTCCACTGAAGCGTTTGATT GTTGGTGATATGGAACGTGTTTACGAAATCGGTCGTGTATTCAGAAACGAAGGTTTGGACACTCACCACAACCCAGAATT TACTGAACTTGAAAGTTATGCTGCATACTGGGACTTCCACGATGTTATGGACGAAGCAGAAGGCATTATTCGTGCTGCAG CTAAGGTTGTTTCAGATGATGGCAAGATTACTTACCAAGGTCAAGACATTGACTTAGGCAAGCCATTCCGTCGCATTCAC ATGGTTGATTTAATCAAGGAAAAGACCGGCCTTGATTTCTGGAAGCCAATGACTCTTGAAGAAGCAACTAAGATTGCTGA AGATCACGATATTCATGTTGAAAAGTTCTGGAAGGTTGGCCACATTATTAACGCCTTCTTTGAAAAGTACTGTGAAGAAA CTATTGTTGACCCAACATTTGTTTACGGTCACCCAGTAGAGATTTCACCACTTGCTAAGAAGAATGCTGATGATCCAAGA TTTACTGACCGTTTCGAAATTTACATCATGGGTGAAGAATACGGTAACGCCTTCTCAGAATTGAACGATCCTGATGATCA ACGTGCTCGTTTTGAAGCTCAAATGGAAGAACGTGAAGCAGGTAACGATGAAGCTGATATGATTGATGAAGATTACCTTC GTGCTATGGAATACGGTATGCCACCTACAGGTGGTTTGGGTATCGGTATTGACCGTTTGGTAATGCTTTTGACTGATGCT CCAGCTATTCGTGATGTTTTGCTCTTCCCAACAATGCGTCCAGAACGTGTTGAATCAATTGATGCCGAAGTTAAGGCTGA TTTAGCTAAGAAGAATAAAGAAAACAAGTAG Protein sequence : MAKNEMNDQLRVRRQKMDEMRENGIEPFGQRKFDRQDLASALEEKYGKEDEDELNDDMPKTKIAGRMLAKRGKGKVGFAD LYDRTGKIQIYVRKDIVGEDNYKIFKKSDIGDFLGIDGEVMKTGTGELTIRATHVTFLSKALRPLPDKYHGLKDVEAIYR QRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI VGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFRRIH MVDLIKEKTGLDFWKPMTLEEATKIAEDHDIHVEKFWKVGHIINAFFEKYCEETIVDPTFVYGHPVEISPLAKKNADDPR FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDA PAIRDVLLFPTMRPERVESIDAEVKADLAKKNKENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-109 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006655122.1 | lysyl-tRNA ligase | VFG1668 | Protein | 9e-110 | 47 |
