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Name : R0052_11450 (R0052_11450) Accession : YP_006656778.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 2032239 - 2033186 bp Length : 948 bp Strand : - Note : COG2826 Transposase and inactivated derivatives, IS30 family DNA sequence : TTGCGTGCCATCGCCCGTGAATTAAACTGTTCTCCTTCTACTATCAGCTATGAGGTTAAGCGCGGTACTGTAGAACTGTA TCATGGCAAAGTCAAAAGATATAAGGCTACTCAAGGGCATGATGCATATCAAGCTCATCGTAAAAATTGTGGGCGCAAAT CAGACTTTCTCAGGAAAACTCAATTCATGCGCTATGTCCACAAGCATTTCTTTAAAGACGGCTGGTCGCTTGATGTGTGC AGTAATCGTGCCACTGCTGTTGGCGCATTTAGCAGCAGAGATGTTGTCTGTACTAAGACTCTTTACAATTATGTCGACCA AGGTCTATTAGATATACATAATTACGACTTGCCAGAGAAGCTTAAACGCAATACCAAGCTTTATCGTATTCGCAAAAATA AGAAAAAACTTGGCAGAAGCATTGAAGAACGTCCTAAAGAGATCAATAAACGTAATGAATTCGGTCATTGGGAATGCGAT TTAGTTCTCGGACATAAGAGCAAAGATGATGAGGTGCTGCTAACCTTATCTGAGCATATGAGTCGTGAGTTTTTAATTCT TCGTATTCCTGACAAGACTTCTGTCAGTGTCATGCAGGCCTTTAAAGAACTCCAAAGGCAATACAGCGAACATTGGAATG ATATTTTTAAAACCATTACCACTGATAATGGCTCAGAGTTTGCAGATCTTTCCAACCTAGAAAAAGCATCCAATACACTG GTTTACTATGCCCATCCTTACACTTCTTGTGATAAGGGAACAGTTGAAAGACACAATGGTCTTATTCGCAGATTCATTCC TAAAGGAGAAGCAATAGCTAACTATTCTTTACAAGACATCATTAATATTGAAACCTGGTGCAATTCTTTGCCAAGAAAGA TACTGGCCTATCATACACCAGATGAAATCTTTGAAAGAGAATTAGATCTAATCTATCAAGCAGCTTAA Protein sequence : MRAIARELNCSPSTISYEVKRGTVELYHGKVKRYKATQGHDAYQAHRKNCGRKSDFLRKTQFMRYVHKHFFKDGWSLDVC SNRATAVGAFSSRDVVCTKTLYNYVDQGLLDIHNYDLPEKLKRNTKLYRIRKNKKKLGRSIEERPKEINKRNEFGHWECD LVLGHKSKDDEVLLTLSEHMSREFLILRIPDKTSVSVMQAFKELQRQYSEHWNDIFKTITTDNGSEFADLSNLEKASNTL VYYAHPYTSCDKGTVERHNGLIRRFIPKGEAIANYSLQDIINIETWCNSLPRKILAYHTPDEIFERELDLIYQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-69 | 51 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-67 | 50 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-67 | 50 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-68 | 50 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-68 | 50 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-68 | 50 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-66 | 50 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-67 | 50 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-67 | 50 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-42 | 46 |
