Gene Information

Name : R0052_09780 (R0052_09780)
Accession : YP_006656489.1
Strain : Lactobacillus helveticus R0052
Genome accession: NC_018528
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1752067 - 1752942 bp
Length : 876 bp
Strand : -
Note : COG1210 UDP-glucose pyrophosphorylase

DNA sequence :
ATGAAAGTAAGAAAAGCGATTATCCCAGCAGCAGGATTAGGTACTAGATTTTTGCCAGCAACTAAGGCATTGCCTAAGGA
AATGTTGCCAATTGTTGACAAGCCAACGATTCAATTTATCGTGGAAGAAGCTAAGGCTTCAGGAATCGAAGATATTTTAA
TCGTTACCGGTAAAAACAAGCGTGCGATTGAAAACCACTTCGACTCTAACCCTGAATTGGAGCAAGACTTGGAAAAGACC
GGTAAATCTGGTTTGCTCAAGTTAACCCAAGAAATTACTGATTTAGGTGTGAACTTGTACTATACTCGTCAACCATACCC
AGCTGGCTTGGGGGATGCCGTCTACCGCGCACGTAGCTTCGTAGCTGGTGAACCATTCGTGATTATGCTTGGCGATGATT
TAATGAAGGATAAAGTTCCTTTGACTAAGCAATTGATCAACGATTACGACAAGACTCATGCATCAACCATTGCCGTTATG
AAGGTGCCACACAAGGAAGTTTCCAAGTACGGTGTAATCGCACCAGATGGCAATATCGCACCTGATTTATACAATGTTAA
AAACTTTGTGGAAAAGCCAGCCGTAGACAAGGCTCCAAGTGATTTGGCAATTATCGGTCGTTACTTGTTGACACCTGAAA
TTTTCGACATTCTGGAACATCAAAAATCAGGTCGTGGTGGTGAAATTCAATTGACTGATGCAATTGATACCATGAACAAG
ACACAACGTGTATTTGCCCATGTATTTAAGGGAGAACGCTTTGACGTGGGTAACAAGGAAGGCTACCTTGAGACTTCTAT
CCAATACGGTTTAATCCACCCAGAAACACGCGATGCTCTTCGCAAGTACATCAAGGAATTAGGTAAGAAGTTATAA

Protein sequence :
MKVRKAIIPAAGLGTRFLPATKALPKEMLPIVDKPTIQFIVEEAKASGIEDILIVTGKNKRAIENHFDSNPELEQDLEKT
GKSGLLKLTQEITDLGVNLYYTRQPYPAGLGDAVYRARSFVAGEPFVIMLGDDLMKDKVPLTKQLINDYDKTHASTIAVM
KVPHKEVSKYGVIAPDGNIAPDLYNVKNFVEKPAVDKAPSDLAIIGRYLLTPEIFDILEHQKSGRGGEIQLTDAIDTMNK
TQRVFAHVFKGERFDVGNKEGYLETSIQYGLIHPETRDALRKYIKELGKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 6e-77 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
R0052_09780 YP_006656489.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 9e-97 69