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Name : R0052_09495 (R0052_09495) Accession : YP_006656432.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Unknown Product : seryl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1696420 - 1697727 bp Length : 1308 bp Strand : - Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGCTTGATATTAAGGTGATTCGTGAGAATCTCGATTGGTCAAAGAAAAAGTTAGCTACACGTGGCATCAAGCCAGAAGA ATTGGATGAATTGGTTGAAATCGATGCTAAGCGTCGTAAGGATTTAACCAAGAGTGAACAATTAAAGGCTAAGCGTAATG ACGTTTCTAAGCAAATTGCTGAAAAGAAGCGCAATAAGGAAGACGCAAGTGATGCTATTCAAGCTATGCGTGAAGTAGGT AAGGAAATCAAAGACTTAGATAAAGAAGTCGCTGAATTGACTGAAAAGCAAAACTACATTTTGCTTAGATTACCTAACTT CCCAGCAGATTCAGATCCAATCGGCCCTGATGATAGCTACAATGAAGAAGTTCGTAAATGGAATGAACCAACTAAGTTTG ACTTTAAGCCAAAGGCTCACTGGGACATTGGTACTGACCTTGGTATTTTAGACTGGGATCGTGCTTCTAAAGTTTCAGGT GCACGTTTTGTTTACTACATTGGTGCAGGTGCGCTTTTGGAACGTGCTGTCTTTAACTTCTTCCTTGATGAAAACACTAA GGATGGCTATACCGAAGTTATTCCACCATACCTTGTTAACGATGCATCAATGCAAGGTACTGGACAATTCCCTAAGTTCC ACGAAGATGTTTATACTATCGTAGATAACGACGATCCAGATAAGCCACGTGACTTGACTTTGATTCCAACTGCTGAAGTT CCTTTGGTAAACTACTTCAGAAATGAAATTATTCATGAAAACAAGTTACCAATCAACGTAACTGCTTTATCACCAGCATT TAGAAGTGAAGCAGGTTCAGCAGGTCGTGATACTCGTGGTTTGATTAGAATGCACGAATTCCGCAAAGTTGAAATGGTTA AGGTATGTAAGCCAGATGAATCATGGGATGAACTTGAAAAGTTGACCCACAATGCTGAACACTTATTGCAAAAGTTAGGT TTGCCATATCACGTAGTCGCTTTGTCAACTGGGGATGCAAGTTTTACTAGTGCTAAGACTTACGATCTTGAAGTTTGGAT GCCTGCACAAGACAAGTACCGTGAAATTTCAAGTTGTTCTAACTGTACTGACTTTCAAGCTCGTCGTGCACAAATTCGTT ACCGTGACGAAGATGGCAAGCTTCACTTAGCTCATACTTTAAATGGTTCTGGTTTAGCCGTAGGTAGAGCAGTAGCTGCA ATTTTGGAAAACTACCAAAACGAAGATGGTTCTGTAACTGTTCCTGCTGTTCTTGTACCATACATGAATGGTATGAAGAA GATTACTAAAGAATCAGGTTTGATTTAA Protein sequence : MLDIKVIRENLDWSKKKLATRGIKPEELDELVEIDAKRRKDLTKSEQLKAKRNDVSKQIAEKKRNKEDASDAIQAMREVG KEIKDLDKEVAELTEKQNYILLRLPNFPADSDPIGPDDSYNEEVRKWNEPTKFDFKPKAHWDIGTDLGILDWDRASKVSG ARFVYYIGAGALLERAVFNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFHEDVYTIVDNDDPDKPRDLTLIPTAEV PLVNYFRNEIIHENKLPINVTALSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKVCKPDESWDELEKLTHNAEHLLQKLG LPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREISSCSNCTDFQARRAQIRYRDEDGKLHLAHTLNGSGLAVGRAVAA ILENYQNEDGSVTVPAVLVPYMNGMKKITKESGLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-130 | 65 |
