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Name : R0052_08550 (R0052_08550) Accession : YP_006656274.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpA Function : - COG functional category : - COG ID : - EC number : - Position : 1516182 - 1518371 bp Length : 2190 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : TTGCTTTGCCAAAATTGTCATAAACGGCCAGCCTCCATTCACCTTTTTACTAAGGTAAATGGCCAAAGCCGCGAAATTGA TTTATGTCAACAATGTTATCAAGAATTAAGAAATCAACAAGGAAATCTAGAAAATATGAACAATAACAACGAATTTTTTG GCGACTTTGATGATTTATTCAACGCTTTAAACGGAAATAACAACAATGCCGCAAATAACAATATGAATGAAAATAATCCA AGAATGCAAATGGGTGGAGGAAATGGAAACGGCAACCGTGGTGGTAAAAGTCTATTAGACCAATACGGTACTGATTTAAC TGCCCTTGCTAAAAAAGGAAAAATTGATCCGGTTATCGGACGTGACAAAGAAATTGCCCGTGTAATTGAAATTTTAAATA GAAGAACTAAAAACAACCCTGTTTTAATTGGTGAAGCAGGTGTGGGTAAGACTGCTGTAGTTGAGGGCTTAGCCCAAGAG ATCGTTGATGGCTCAGTCCCAGCTAAATTACAAAATAAACGTATCATTTCATTAAATGTAGTTTCACTTGTTCAAGGGAC CGGTATTCGTGGTCAATTTGAACAACGAATGGAACAATTAATTAAAGAATTGCAACAAAATGATGACATCATTTTATTCA TTGATGAAATTCACGAAATTGTTGGTGCCGGTAACGCTGAAGGCGGTATGGATGCCGGAAATATTATCAAACCAGCCTTA GCTCGTGGTGAGCTTCAATTAGTTGGTGCTACTACTATTAAGGAATACCGTGACATCGAAAAGGATTCAGCTTTAGCACG TAGATTCCAACCAGTTGAAGTAAAAGAACCATCTATTGATGAAACTATTCGTATTTTGAAAGGTATTCAACAACGCTACG AGGATTATCACCACGTTCATTACACCGATGATGCAATTGAAGCAGCCGCTAAATTGTCAGCCCGTTATATTCAAGACAGA TTTTTACCTGATAAAGCCATCGACTTATTAGATGAAGCTGGTTCAAGAATGAACTTAACTATTCCTTACATCGACAAAGA TAAGATGCAAGAAAGAATCAACGCAGCTGAACAATTAAAGGAAGAAGCTTTAAAGAACGAAGATTACGAAAAGGCTGCTT ATTACCGCGATCAAATTGAAAAATACGAAAAAGTAAAGGATCAAAAAGTTGACCCAGATAAATCTCCAATTATTACCAAC AAGATTATGAATAAGATTGTTGAAGAAAAAACTGGCATTCCTGTCGGCGATATTCAAAAGCAAGAAGAAAATCAATTGCG AAACTTAGCTAACGACTTAAAAGCTCATGTCATTGGACAAGACAAGGCAGTTGAAAAAGTTGCTCGTGCAATTCGCCGTA ACAGAATTGGTTTTAACAAATCAGGTCGTCCAATCGGCTCCTTCCTCTTCGTAGGACCAACTGGTGTTGGTAAGACTGAA CTTGCCAAACAATTAGCTAAGCAAATGTTTGGTTCAGAAAATGCCATGATCCGTTTCGATATGTCTGAATACATGGAACA ATATTCTGTTTCTAAATTAATCGGTTCTGCTCCTGGCTACGTTGGCTATGAAGAAGCAGGTCAATTAACTGAACAAGTAA GACATAATCCTTACAGCTTAATCTTGCTTGATGAAATTGAAAAAGCTCACCCAGACGTACTAAACTTGTTCTTACAAATT TTAGACGACGGACGCTTAACTGACTCACAAGGCAGAACAGTTTCATTCAAAGACACAATCATCATTATGACTTCTAATGC AGGTCAAGGCATCAAGAATGCTAGTGTTGGTTTTACTGCAGAAAATGAAACCGAGTCTAAAGAATCTGCTAGAAACAATA TGAGTCAATTCTTCAAGCCAGAGTTCTTAAACCGTCTAGACGATGTCATTGAATTCAATGAATTAACTAAGCCAGACTTA CTTAAGATTGTTGACTTAATGCTTAAGAACACTAATGATATGGTTAAAGACCAAGGCTTGCATATCGATGTAATTCAAGC CGCTAAAGATAAATTAGTTGAAGAAGGATTCAATCCTGCATTAGGTGCTCGTCCACTTCGTCGGACAATTCAAGAAGAAA TTGAAGACAATGTTGCAGACTTCAAGCTTGATCATACTGATAGCAAGAACTTAAAGGCTGATGTGGTCGATGATAAAATC GTTATCAGCGATGAAAATGCGGCTGAATAA Protein sequence : MLCQNCHKRPASIHLFTKVNGQSREIDLCQQCYQELRNQQGNLENMNNNNEFFGDFDDLFNALNGNNNNAANNNMNENNP RMQMGGGNGNGNRGGKSLLDQYGTDLTALAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQE IVDGSVPAKLQNKRIISLNVVSLVQGTGIRGQFEQRMEQLIKELQQNDDIILFIDEIHEIVGAGNAEGGMDAGNIIKPAL ARGELQLVGATTIKEYRDIEKDSALARRFQPVEVKEPSIDETIRILKGIQQRYEDYHHVHYTDDAIEAAAKLSARYIQDR FLPDKAIDLLDEAGSRMNLTIPYIDKDKMQERINAAEQLKEEALKNEDYEKAAYYRDQIEKYEKVKDQKVDPDKSPIITN KIMNKIVEEKTGIPVGDIQKQEENQLRNLANDLKAHVIGQDKAVEKVARAIRRNRIGFNKSGRPIGSFLFVGPTGVGKTE LAKQLAKQMFGSENAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQVRHNPYSLILLDEIEKAHPDVLNLFLQI LDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKNASVGFTAENETESKESARNNMSQFFKPEFLNRLDDVIEFNELTKPDL LKIVDLMLKNTNDMVKDQGLHIDVIQAAKDKLVEEGFNPALGARPLRRTIQEEIEDNVADFKLDHTDSKNLKADVVDDKI VISDENAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-153 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| R0052_08550 | YP_006656274.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0080 | Protein | 0.0 | 62 |
| R0052_08550 | YP_006656274.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0079 | Protein | 2e-156 | 51 |
