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Name : R0052_06875 (R0052_06875) Accession : YP_006655984.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1199508 - 1200683 bp Length : 1176 bp Strand : + Note : COG3328 Transposase and inactivated derivatives DNA sequence : ATGATTTTACCAAAAATATGGCTCAAGCACTATTCAATCAAGACAAAGTTAATGATTTTTTTGCGCAAGGAAATTCAAAC TGCAGTTAATCAATTGCTTGAAGCTGAATTGACTGCCTTTTTAGGCTATGATCCTTATGCAAAAAGCGGATGGAACTCTG GCAATTCCAGAAACGGCATCTATTATCGCAAGGTTGATACGCAGTTTGGCCAGATCGAAATTCAGGTTCCCAGAGACATA AACGGCGAATTTCATCAGCACACTCTGCCTGACTACAAGCAGCACTCGGACGTCCTGGAAAGCATGATTATCAAGCTTTA TGCCAAAGGCGTCACTACCAGAGAAATAGCCGATCTGATTGAAAAGATGTACGGCAGCCATTACAGTCCGGCTCAGGTAT CAAATATTTCCAAGCAAATGATTCCAAAGGTTGAAGCCTATCACAAACGCAAGCTTAGCGACAGGTTCTTTTGCGTTTAT CTTGACGCAACGTATCTTCCGCTGTGCCGAGAAATGTTTGAGCGTGAAGCCGTCTATATTGCCATCGGCATCAGGCCCAA TGGCCATAAAGAAGTAATCGACTACTGCATAGCACCCAGCGAAAACGTCGAAGTTTGGACTGAAATGCTTCAAAACATGA GATCGCGGGGTTTGAAGCAAGTCGAGCTTTTCTTGTCTGACGGTGTTGTCGGCATGAAAACAGCTCTGGCAAAGACTTAT CCCAAAGCACATTTTCAGCGCTGCCTGGTTCATGTCATGCGCAATATTTGCAATAAAGTGCGTGTTGACGATCGTGAGAC AATCATGAGCGATTTCAAGCAGATTCATAGGCAGCCTAACAAGACAGCCGCTGTACAAACTCTTCATGCATTCTATGACA AATGGAACAAGGCATACAATCATGTCATTAGGAATCTAAAAGACATTGAGCCTGATCTATTGGTCTTTTACAACTATCCC AAACAGATCAGACCCTCAATCTATTCCACCAACATGATTGAATCCTTTAACAATGTCGTTAAACGCAAGGCAAAGCCCAA AGCAGAGTTTCCAAGCGAGCAGTCGCTTGATACTTTCATTGGCATTCAGGCAATAAGCTACAATGATCGCTACTTCAACC GAATCCATAAAGGCTTCGGCCAAGTGCAGGATACATTGGAATCCTACTTTGACTAA Protein sequence : MILPKIWLKHYSIKTKLMIFLRKEIQTAVNQLLEAELTAFLGYDPYAKSGWNSGNSRNGIYYRKVDTQFGQIEIQVPRDI NGEFHQHTLPDYKQHSDVLESMIIKLYAKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHKRKLSDRFFCVY LDATYLPLCREMFEREAVYIAIGIRPNGHKEVIDYCIAPSENVEVWTEMLQNMRSRGLKQVELFLSDGVVGMKTALAKTY PKAHFQRCLVHVMRNICNKVRVDDRETIMSDFKQIHRQPNKTAAVQTLHAFYDKWNKAYNHVIRNLKDIEPDLLVFYNYP KQIRPSIYSTNMIESFNNVVKRKAKPKAEFPSEQSLDTFIGIQAISYNDRYFNRIHKGFGQVQDTLESYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAM21184.1 | transposase | Not tested | Not named | Protein | 1e-95 | 50 |
| ef0057 | AAM75262.1 | EF0057 | Not tested | Not named | Protein | 1e-95 | 50 |
| EF0595 | NP_814357.1 | ISEf1, transposase | Not tested | Not named | Protein | 2e-95 | 50 |
| unnamed | AAM21176.1 | transposase | Not tested | Not named | Protein | 1e-95 | 50 |
