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Name : R0052_05960 (R0052_05960) Accession : YP_006655837.1 Strain : Lactobacillus helveticus R0052 Genome accession: NC_018528 Putative virulence/resistance : Unknown Product : transposase IS1201 Function : - COG functional category : - COG ID : - EC number : - Position : 1038291 - 1039220 bp Length : 930 bp Strand : + Note : COG3328 Transposase and inactivated derivatives DNA sequence : ATGTTTCATCAGCACACGCTGCCTGACTACAAGCAGCACTCCGATGTCTTGGAAAGCATGATTATCAAGCTATATTCTAA AGGCGTAACCACCAGAGAAATAGCCGACTTGATTGAAAAGATGTACGGCAGTCATTACAGCCCAGCTCAGGTATCTAACA TCTCCAAGCAGATGATTCCAAAAGTTGAGGCCTATCATCAGCGCAAACTCAGTGACAAGTTCTTCTGCGTTTATTTAGAC GCAACTTACATTCCTTTGCGTCGCATAACCTTTGATCGTGAAGCAGTTTATATTGCTATTGGCATCAAGCCTAATGGTCA CAAGGAAGTTATCGATTACCGCATTGCTCCCAGCGAAAACGTTGAGAATTGGACGGAAATGCTTCAAGACATGAAGTCTC GCGGTCTAGAGCAGGTTGAGCTCTTTCTTTCAGATGGCGTTGTTGGTATGAAAACAGCGTTGGAGCAGACTTATCCGAAA GCTCATTTTCAACGCTGTCTAGTTCATGTCATGCGCAATATTTGCGCTAAAGTACGCGTAGATGATCGCGAAACGATCAT GAATGAATTCAAGCAAATCCATCAACAGCCAAATAAAGAAGCTGCGATCAAAGTCTTGCACGCCTTCTATGACAAGTGGA ACAGAGCTTATAATCATGTCATTAGAAACCTCAAGGAGATTGAACCTGATCTGCTGGTCTTTTATGACTATCCTAAACAA ATCAGGGCCTCAATTTACTCCACCAATATGATCGAATCCTTTAACAACGTTATCAAGCGTAAAGCTAAGCCTAAAGCAGA GTTTCCAACTGAACAGTCGCTTGATACTTTTATTGGCATTCAGGCGATGAGCTACAACGAGCGCTATTTCAATCGAATCC ACAAAGGCTTTGGTCAGGTTCAGGATACCTTAGAATCCTACTTTGATTAA Protein sequence : MFHQHTLPDYKQHSDVLESMIIKLYSKGVTTREIADLIEKMYGSHYSPAQVSNISKQMIPKVEAYHQRKLSDKFFCVYLD ATYIPLRRITFDREAVYIAIGIKPNGHKEVIDYRIAPSENVENWTEMLQDMKSRGLEQVELFLSDGVVGMKTALEQTYPK AHFQRCLVHVMRNICAKVRVDDRETIMNEFKQIHQQPNKEAAIKVLHAFYDKWNRAYNHVIRNLKEIEPDLLVFYDYPKQ IRASIYSTNMIESFNNVIKRKAKPKAEFPTEQSLDTFIGIQAMSYNERYFNRIHKGFGQVQDTLESYFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAM21176.1 | transposase | Not tested | Not named | Protein | 4e-78 | 52 |
| unnamed | AAM21184.1 | transposase | Not tested | Not named | Protein | 4e-78 | 52 |
| ef0057 | AAM75262.1 | EF0057 | Not tested | Not named | Protein | 4e-78 | 52 |
| EF0595 | NP_814357.1 | ISEf1, transposase | Not tested | Not named | Protein | 8e-78 | 52 |
| ef0035 | AAM75241.1 | EF0035 | Not tested | Not named | Protein | 7e-53 | 50 |
