Gene Information

Name : BPC006_I0801 (BPC006_I0801)
Accession : YP_006651598.1
Strain :
Genome accession: NC_018527
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 782062 - 782718 bp
Length : 657 bp
Strand : -
Note : -

DNA sequence : 
GTGAGGAACGGCGTCGAGGCCGACACGGCCCTGTCGATGCAGACTTTCGACCTGTTGATCCTCGATCTCGGCCTGCCCAG
AATGTCCGGCCTCGAGGTGCTGCGCCGCCTGCGCGCGCGCAACTCGAACCTGCCCGTGCTGATCCTGACGGCCGCCGACA
GCGTCGACGAGCGCGTGAAAGGGCTCGACCTGGGCGCCGACGACTACATGGCGAAGCCGTTCGCGCTCAACGAACTCGAG
GCGCGCGTGCGCGCGCTGACGCGGCGCGGCGCGGGAGGCGGGCCGACCGTCGTGCGGCATGGCTCGCTGTCGTTCGACCA
GGTCGGCCGGATCGCCTATGCGAACGAACGCGTGCTCGAGCTGTCCGCGCGCGAGCTCGGGCTGCTCGAGGTGCTGCTGC
AGCGCATCGGCCGGCTGGTGTCGAAGGAGCAGCTCGTCGATCACCTGTGCGAATGGGGCGAGGAAGTCAGCAACAACGCG
ATCGAGGTCTACGTCCACCGGCTGCGCAAGAAGATCGAGCCGAGCGGCGTGCGGATCACGACCGTGCGCGGCCTCGGCTA
CTGCCTCGAGAAAGCCGCGCCCGCGGGCGCGAGCGACGCGCCGAACGCCGCCGCGTCGCTGGCGGCCGAGGCCGTCGCCG
GCCAGCCGGTGCGCTAG

Protein sequence : 
MRNGVEADTALSMQTFDLLILDLGLPRMSGLEVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELE
ARVRALTRRGAGGGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCEWGEEVSNNA
IEVYVHRLRKKIEPSGVRITTVRGLGYCLEKAAPAGASDAPNAAASLAAEAVAGQPVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0083 Protein 7e-30 47
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0638 Protein 3e-24 46
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0487 Protein 1e-33 45
BPC006_I0801 YP_006651598.1 DNA-binding response regulator NC_002516.2.879194.p Protein 2e-27 45
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0347 Protein 2e-27 43
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0308 Protein 3e-27 42
BPC006_I0801 YP_006651598.1 DNA-binding response regulator CP001138.1.gene1939. Protein 7e-24 42
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0111 Protein 6e-26 42
BPC006_I0801 YP_006651598.1 DNA-binding response regulator CP001918.1.gene2526. Protein 2e-24 41
BPC006_I0801 YP_006651598.1 DNA-binding response regulator CP000034.1.gene2022. Protein 6e-24 41
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0197 Protein 7e-27 41
BPC006_I0801 YP_006651598.1 DNA-binding response regulator CP000647.1.gene1136. Protein 9e-24 41
BPC006_I0801 YP_006651598.1 DNA-binding response regulator Y16952.3.orf35.gene. Protein 5e-22 41
BPC006_I0801 YP_006651598.1 DNA-binding response regulator BAC0530 Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_I0801 YP_006651598.1 DNA-binding response regulator VFG1390 Protein 9e-30 45
BPC006_I0801 YP_006651598.1 DNA-binding response regulator VFG0473 Protein 2e-34 44
BPC006_I0801 YP_006651598.1 DNA-binding response regulator VFG0475 Protein 6e-24 42