Gene Information

Name : BPC006_I3337 (BPC006_I3337)
Accession : YP_006654093.1
Strain :
Genome accession: NC_018527
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis/export periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3233705 - 3234826 bp
Length : 1122 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCGCGGTCACGCTCGCCGGTTGCTCAAGTATCCCTACGTCGGGGGCCAGTGGCGCGCAAATCGCGCGGGCTGCGCA
GAGTCCATCCGGAATTCAGATCGTCGATGTGACCGAGGATGTCGCGCGCCAGCTGTTTGCTGATCGAAACACGGCGGACT
TCGTGACGGCGCTGGGCGGCGGTGCGTCGTTCCGGCAACAGTTGGGCGTCGGCGATACGATTCAGGTGTCCATCTGGGAG
GCGCCACCCGCCACGCTTTTTGGCGCGGCTCAGTCGGAAGGGAGTTCGGGGCCGGCGAACGCGCGCGTGACGGTGTTGCC
CGATCAAGCCATCGATGGCGACGGCAATGTCAATATTCCGTTTGCGGGCCAGGTGAAGGCGGCCGGCCGCTCGCCCACGC
AGTTGGCGCGTGAGATTGCCGCGCGGCTGAAGAGCATGGCGCACGATCCGCAAGTGCTCGTGAAGCTTTCACGCAACGAG
ACGTCATATGTGACGGTCGTGGGCGATGTGGCCGAAAACGCTCGCATGGCTCTGACCGCTCGGGGCGAGCGCCTGCTTGA
TGCATTGGCGAGCGCAGGCGGGGCGAAGCACCCGGTTGACAAAGTTACGATCCAGATAACGCGCGGCAAGACGGTGGCCT
CGTTGCCGCTCGACATGGTTATTCGTGATCCGCGGCAGAACGTCCCGTTGCATGCGGGCGATGTGGTCACTGTCCTGTTT
CAGCCATATAGCTTTACGGTGCTCGGCGCGACGGGCAAGAATGACGAAATCAATTTTGAAGCGAAGGGCATCACGCTTGC
GCAGGCCCTGGCGCGTGCTGGCGGCTTGCAGGATTCGCGCGCCGATGCAAAGGGCGTATTCATCTTCCGACTTGAAGACG
CCAACGCGCTGAAATGGCCGACGGCTCCCGTGCGTACGACTGCGGATGGAAAGGTGCCTGTCGTGTATCGCGTGAATCTT
CGCGATCCGAATTCGTTCTTCGTGGCTCAGAGCTTCAGGGTCGACAACAACGATCTGTTGTACGTTTCGAATGCGCCGAT
TGCCGAACTTCAAAAATTCTTGAATGTCGTGTTCTCCGTTGCGTATCCGGTGATTACCGGCGTTCAGACAGTCAGGTACT
GA

Protein sequence : 
MGAVTLAGCSSIPTSGASGAQIARAAQSPSGIQIVDVTEDVARQLFADRNTADFVTALGGGASFRQQLGVGDTIQVSIWE
APPATLFGAAQSEGSSGPANARVTVLPDQAIDGDGNVNIPFAGQVKAAGRSPTQLAREIAARLKSMAHDPQVLVKLSRNE
TSYVTVVGDVAENARMALTARGERLLDALASAGGAKHPVDKVTIQITRGKTVASLPLDMVIRDPRQNVPLHAGDVVTVLF
QPYSFTVLGATGKNDEINFEAKGITLAQALARAGGLQDSRADAKGVFIFRLEDANALKWPTAPVRTTADGKVPVVYRVNL
RDPNSFFVAQSFRVDNNDLLYVSNAPIAELQKFLNVVFSVAYPVITGVQTVRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrA NP_273135.1 capsule polysaccharide export outer membrane protein Not tested IHT-A Protein 8e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_I3337 YP_006654093.1 capsular polysaccharide biosynthesis/export periplasmic protein VFG2566 Protein 1e-164 100
BPC006_I3337 YP_006654093.1 capsular polysaccharide biosynthesis/export periplasmic protein VFG0255 Protein 3e-66 42