Gene Information

Name : BPC006_I3171 (BPC006_I3171)
Accession : YP_006653928.1
Strain :
Genome accession: NC_018527
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3075592 - 3077505 bp
Length : 1914 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCGAGCATTTTGCCCGAAGGCTTCGTGGCTTTCCCTGGGCGCCTTTCTGTTCGATCTGATGGCGGTCGTATGCGC
GTGGCTGATCGCGTATGTGGTCCGGTTCAATGGTGCGATGCCGCCTGAATTCCTGAAAGGCGCCTTCGTCGCGCTCGCAT
GGGTGGTGCCGTTGTATGGCCTGCTGTTTCATGTTTTCGGGTTGTATCGCGGTCTCTGGGTATTTGCGAGCCTGCCGGAT
CTGCTGCGTATCTCGAAGGCCGTGGTGGGCGGCGGCTTGATCGTGATGATCGGCGCGGTGATGCTGCAGCCGGTTCCGAT
CATTCCGCGTTCGGTTCTCGTGCTGTCGCCGATGCTGCTGTTTCTTGCGATGGGTGGTGCACGTGCGCTCTATCGGGCGA
CGAAGGAGTTCTATCTATACGGCGGACTGATCGGGCAGGGCAAGCCCGTGCTGATTCTCGGCGCCGGCAGTGCCGGCGCG
AGCCTCGCCCGTGAACTGTCGCGCTCCGGTGAGTGGCGTCTTGCCGGTCTGCTCGATGACGATCCCGCGAAACACGGGCG
CGAAGTCTACGGCTATAAGGTACTGGGTTCGATCGGCGAAGTCGCAGACTGGGCCGAGGCCGCGAAAGCCGAATACGCGA
TCATCGCGATTCCATCCGCATCGGTCGAAGCGCAACGTCGCTTCGCCACCCTCTGCGTGCGCGCCGGCGTCAGGGCCATG
GTGCTGCCGTCGCTGACCGCATTGATGCCGGGCCAGGGCATTCTGTCGCAGATCCGCCAGATCGATCTCGAAGACCTGCT
CGGCCGCGAGGCCGTGACGATCGACACGCCGCACGTCGAGGCGCTGCTGCGCGGCCGCGTCGTGATGGTGACGGGCGCGG
GCGGCTCGATCGGCTCGGAGCTGTGCCGCCAGATCCTGAAGTTCCAGCCCGCGCAACTGATCGCGTTCGATCTGTCCGAA
TATGCGATGTACCGGCTCACGGAAGAGTTGCGCGAGCGCTTCCCCGATCTGCCCGTCGTGCCGATCATCGGCGATGCGAA
GGATTCGCTGCTGCTCGATCAGGTGATGTCGCGCTATGCGCCGCACATCGTGTTCCATGCGGCCGCGTACAAGCACGTGC
CGTTGATGGAGGAGCTCAACGCATGGCAGGCGCTGCGCAACAACGTGCTCGGCACGTATCGCGTCGCGCGCGCGGCGATT
CGCCACGACGTCAGGCACTTCGTGCTGATCTCGACCGACAAGGCCGTGAACCCGACGAACGTGATGGGCGCGAGCAAGCG
CCTGGCCGAGATGGCTTGCCAGGCGCTGCAGCAGACGAGCGCGCGCACGCAGTTCGAGACGGTGCGCTTCGGCAACGTGC
TCGGCAGCGCCGGCAGCGTGATTCCGAAATTTCAGCAGCAGATCGCCAAGGGCGGCCCGGTGACCGTCACGCATCCGGAA
ATCACGCGCTTCTTCATGACGATTCCCGAGGCGTCGCAACTCGTGCTGCAGGCGTCGAGCATGGGGCAGGGCGGCGAGAT
CTTCATTCTCGACATGGGCGAGCCGGTGAAGATCGTCGATCTCGCGCGCGATCTGATTCGCCTGTACGGCTTCACCGAGG
AGCAGATCCGCATCGAGTTCAGCGGGCTGCGCCCGGGCGAGAAGCTCTATGAGGAACTGCTCGCCGACGACGAGACCACC
ACCCGCACGCCACACCCGAAGCTGCGCACCGCGAAGGCGCGCGAGGTGCCCGATCATCTGCTCGACGAACTGCTGCCGTG
GCTGATGCAGCACCGCGTGCTGAGCGACGATGAAGTGCGGCGCGACTTGCGGCGCTGGGTGCCCGAGTATCAGCCGGCCG
TCGGCCCGACGCTGCAGAGCGTGCCGACCGGCAACGGGCTCGTCGCCGGCATCGGGCGCGAGGCCGGGCGCTGA

Protein sequence : 
MTRAFCPKASWLSLGAFLFDLMAVVCAWLIAYVVRFNGAMPPEFLKGAFVALAWVVPLYGLLFHVFGLYRGLWVFASLPD
LLRISKAVVGGGLIVMIGAVMLQPVPIIPRSVLVLSPMLLFLAMGGARALYRATKEFYLYGGLIGQGKPVLILGAGSAGA
SLARELSRSGEWRLAGLLDDDPAKHGREVYGYKVLGSIGEVADWAEAAKAEYAIIAIPSASVEAQRRFATLCVRAGVRAM
VLPSLTALMPGQGILSQIRQIDLEDLLGREAVTIDTPHVEALLRGRVVMVTGAGGSIGSELCRQILKFQPAQLIAFDLSE
YAMYRLTEELRERFPDLPVVPIIGDAKDSLLLDQVMSRYAPHIVFHAAAYKHVPLMEELNAWQALRNNVLGTYRVARAAI
RHDVRHFVLISTDKAVNPTNVMGASKRLAEMACQALQQTSARTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPE
ITRFFMTIPEASQLVLQASSMGQGGEIFILDMGEPVKIVDLARDLIRLYGFTEEQIRIEFSGLRPGEKLYEELLADDETT
TRTPHPKLRTAKAREVPDHLLDELLPWLMQHRVLSDDEVRRDLRRWVPEYQPAVGPTLQSVPTGNGLVAGIGREAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-85 43
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-86 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPC006_I3171 YP_006653928.1 capsular polysaccharide biosynthesis protein VFG1300 Protein 4e-87 43
BPC006_I3171 YP_006653928.1 capsular polysaccharide biosynthesis protein VFG0029 Protein 1e-75 43