Gene Information

Name : PCC21_008900 (PCC21_008900)
Accession : YP_006645546.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1005276 - 1005527 bp
Length : 252 bp
Strand : -
Note : -

DNA sequence :
ATTCACCGAACACCAGATCATCGCCGTTCTGAAGCCCGTCGAAGCCGGCGCACTGTTAAAGACGTCTGCCGCGAGGCCGA
GATCTCTGAGGCCTCGTACTACAACTGGAAAGTGAAGTTCGGCGGCATGGAAGCCTCTGATATCAAAAAGATGAAGGACC
TTGAGGATGAAAACCGCCGGCTGAAACAGATGTTTGCGGACCTGAGTCTCGAGTGCCGCGCCCTGAAAGACGTTATTGAA
AAAAAGCTTTAA

Protein sequence :
MHRTPDHRRSEARRSRRTVKDVCREAEISEASYYNWKVKFGGMEASDIKKMKDLEDENRRLKQMFADLSLECRALKDVIE
KKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 6e-12 50
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 6e-12 50
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 6e-12 50
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 1e-11 50
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 5e-13 49
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 8e-13 49