Gene Information

Name : PCC21_008220 (PCC21_008220)
Accession : YP_006645478.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : polysulfide reductase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 933347 - 934045 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGAATTATCTCGCCGTCGTTTTATTGCTTATATGGGGGGAACGATTGCCATGAGTGGGCATATCGGTCTCGCACA
AGCGCAAAATGAACCCGAAAAAACGCAGGGTAAATTAGCGGTTAAATATGGTTTATTGCATAACGAAATGCGCTGTATCG
GCTGCAAAGCCTGTATCAAGGCCTGTAAAGAGACCAATAACGTGCCCGATGGCGTAACCCGGCTGGATATACTGCAAACC
GTCGATATTCCTGCCGTCGAGAAGACGCGCGCCATTAAGCAATTTTTCCGTAAATCCTGTCAGCATTGTGAAAACCCGCC
CTGCGTTGCGGTCTGCCCAACGGGAGCCTCCTTCAAAGACGCGCTCACCGGTATCGTCGACGTCAACGATAAACGCTGCG
TGGGCTGCCGCTACTGCATTGCCGCGTGTCCTTACCATGTGCGTTTCATCAACCCGGTCACGAAGACGGCAGACAAATGT
AACTTTTGTCGGGAAACCAATCTGGCCGCCGGAAAGCAACCCGCCTGCGTCGAAATCTGCCCCACCAAAGCCTTGGTATT
TGGCGATCTCAACGATCCTGAAAGCAACATTGCCAAGATGATCGCGAGCAACGCGACCTACCGCTCCAAGGTCTATTTGG
GCACAGAACCCCAGCTCTACCGTATGCCGGGGAAACGAGGAGCAATCGACAATGCATAA

Protein sequence : 
MEELSRRRFIAYMGGTIAMSGHIGLAQAQNEPEKTQGKLAVKYGLLHNEMRCIGCKACIKACKETNNVPDGVTRLDILQT
VDIPAVEKTRAIKQFFRKSCQHCENPPCVAVCPTGASFKDALTGIVDVNDKRCVGCRYCIAACPYHVRFINPVTKTADKC
NFCRETNLAAGKQPACVEICPTKALVFGDLNDPESNIAKMIASNATYRSKVYLGTEPQLYRMPGKRGAIDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-28 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-28 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-28 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-28 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 1e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_008220 YP_006645478.1 polysulfide reductase subunit VFG0486 Protein 8e-29 42