Gene Information

Name : PCC21_006750 (PCC21_006750)
Accession : YP_006645331.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 755216 - 756115 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGCAAGAACACGATCAGGCGCTTATCGAGCAGTTTCTCGATGCGCTGTGGCTGGAAAGAAATCTGGCAGAGAATACGCT
GGCCTCTTATCGGCTGGATCTGCGTACGCTGGCAGAGTGGTTGGCGCATCATGACAATGATTTATTGCAGGCACAGTCGC
TCGATCTTCAGGCGTTTCTCGCTGACAGAGTTGAGGGGGGCTACAAGGCCACCAGCTCGGCTCGCTTGCTGAGCGCGATG
CGCCGCTTCTTTCAGTACCTTTATCGGGAAAAGCGTCGCAGCGACGATCCGAGTGCGGTGCTGTCATCGCCAAAACTGCC
GCAGCGTCTACCCAAAGATTTGAGCGAGGCGCAGGTTGATACGTTGCTCAACGCCCCAAGTATTGAACAACCGCTGGAAT
TACGCGATAAGGCCATGCTTGAGGTATTGTATGCGACGGGGCTGCGTGTTTCCGAGCTGGTCAGTTTGACGATGAGCGAT
GTCAGCCTGCGGCAGGGCGTGGTACGCGTGCTGGGGAAAGGCAATAAAGAACGGCTGGTGCCGCTGGGTGAAGAAGCGGT
GTACTGGATCGAGTATTATCTGGAACATGGTCGCCCGTGGCTGCTGAATGGGCAGACGCTGGATGTGCTGTTTCCCAGCA
ATCGTGCACGGCAAATGACGCGCCAGACGTTCTGGCACCGCATCAAGCATTATGCGGTGCTGGCGTCCATCGACAGCGAG
AAGCTCTCGCCGCACGTCTTGCGTCACGCGTTTGCGACCCATTTATTGAACCACGGCGCGGATTTACGGGTCGTACAGAT
GCTCTTGGGGCACAGCGATCTTTCCACGACACAGATTTACACCCATGTTGCGACGGAGCGGCTGAAACAGCTGCATCAGC
AGCACCATCCGCGCGCATAG

Protein sequence :
MQEHDQALIEQFLDALWLERNLAENTLASYRLDLRTLAEWLAHHDNDLLQAQSLDLQAFLADRVEGGYKATSSARLLSAM
RRFFQYLYREKRRSDDPSAVLSSPKLPQRLPKDLSEAQVDTLLNAPSIEQPLELRDKAMLEVLYATGLRVSELVSLTMSD
VSLRQGVVRVLGKGNKERLVPLGEEAVYWIEYYLEHGRPWLLNGQTLDVLFPSNRARQMTRQTFWHRIKHYAVLASIDSE
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-60 61
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-60 61