Gene Information

Name : PCC21_040460 (PCC21_040460)
Accession : YP_006648702.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : heat shock protein HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4592260 - 4593591 bp
Length : 1332 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGAAATGACCCCGCGCGAGATAGTCAGCGAACTCGACAGCTATATCATCGGCCAGCATAAAGCGAAACGCGCCGT
TTCCATCGCGCTGCGTAACCGCTGGCGCCGTATGCAGTTGGACGAAGCACTTCGTCATGAAGTGACGCCTAAAAATATTC
TCATGATCGGCCCGACCGGCGTCGGTAAAACCGAAATCGCTCGCCGTTTGGCGAAGCTCGCCAATGCGCCGTTCATCAAA
GTGGAAGCCACCAAATTCACCGAAGTGGGCTACGTAGGTAAAGAAGTTGACTCCATCATCCGCGATCTGACGGATTCCGC
GATCAAGATGGTGCGCCTCCAGTCCATCGAAAAAAACCGCTTCCGTGCGGAAGAGATGGCGGAAGACCGTATTCTGGACG
TGCTGATTCCACCAGCGAAAAACAACTGGGGACAGGCGGAAAGCACGCAGGAGCCTTCCGCTGCACGTCAGGCATTCCGC
AAGAAACTGCGTGAAGGCCAGTTGGACGACAAAGAGATCGAGATCGACCTGGCGGCCGCTCCCGTTGGCGTAGAGATCAT
GGCTCCTCCGGGCATGGAAGAAATGACCAACCAGCTCCAGTCCATGTTCCAGAATCTGGCAGGACAGAAGCAGAAAGCCC
GTAAGGTCAAAATCAAAGACGCCTTCAAGCTGCTGATAGAAGAAGAAGCCGCCAAGCTGGTGAATCCGGAAGAGCTGAAA
CAGCAGGCGATCGAAGCCGTTGAGCAGCACGGTATCGTGTTCATCGATGAGATCGACAAAATCTGTAAGCGTGGCGAAAG
CTCCGGCCCGGATGTGTCCCGTGAAGGCGTTCAGCGCGATCTTCTGCCGCTGGTTGAAGGCTGTACCGTGTCCACCAAGC
ACGGCATGGTCAAAACCGACCACATCCTGTTTATCGCGTCCGGTGCGTTCCAGGTTGCCAGCCCGTCCGATCTGATTCCA
GAATTGCAGGGGCGTTTGCCGATTCGCGTAGAGTTGCAGGCGCTGACCACGGAAGATTTCGAACGCATCCTGACCGAGCC
GAGCGCGTCGCTGACCGAGCAGTACAAAGCGCTGATGGCGACGGAAGGCGTAAATATTTCGTTCACCGCCGATGGTATCC
GCCGTATTGCTGAAGCCGCCTGGCAGGTCAATGAAAGCACCGAGAATATCGGCGCGCGCCGTCTGCATACCGTGATGGAG
CGTTTGATCGAAGATGTGTCTTACGATGCCAGCGAAATGAACGGTCAAAGCGTTACCATTGACGCAGATTACGTACGTAA
TCATCTGGATGAATTAGTAGCAGATGAAGATCTGAGTCGATTTATCTTATAA

Protein sequence :
MSEMTPREIVSELDSYIIGQHKAKRAVSIALRNRWRRMQLDEALRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK
VEATKFTEVGYVGKEVDSIIRDLTDSAIKMVRLQSIEKNRFRAEEMAEDRILDVLIPPAKNNWGQAESTQEPSAARQAFR
KKLREGQLDDKEIEIDLAAAPVGVEIMAPPGMEEMTNQLQSMFQNLAGQKQKARKVKIKDAFKLLIEEEAAKLVNPEELK
QQAIEAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQVASPSDLIP
ELQGRLPIRVELQALTTEDFERILTEPSASLTEQYKALMATEGVNISFTADGIRRIAEAAWQVNESTENIGARRLHTVME
RLIEDVSYDASEMNGQSVTIDADYVRNHLDELVADEDLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 9e-101 47