Gene Information

Name : PCC21_038270 (PCC21_038270)
Accession : YP_006648483.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4332510 - 4333322 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGTCGATATCCTCCGATACTCAAACTCGCCACGACAGGCACGGCTGCTATCCCGACGCTGTCACGGTTGACGATTTCCA
ACTCAATCTGGCGGCAGTTCAGGCTCGCATCGCAGCAGCTTGTCAGCGCGTTGGCCGCGATCCTGCAACAGTGCGGCTGC
TGCCCGTCAGCAAAACCAAGCCTGAAAACCGCCTGCGTATGGCCCATGCGGCTGGTTGTCGGATATTGGGTGAAAACAAG
GTGCAGGAAGCGTTCCGTAAATGGGAAGCCATGCAGGATTTAACCGATTTACAGTGGTCGGTCATTGGTCACCTGCAAAC
CAACAAGGTTAAGCTGGTGGCACGCTTCGCTAGCGAGTTTCAGGCGTTGGACAGTCTGCGGCTGGCTGAAGCGCTGGATC
GTCGCTTGCAGATTGAAGGGCGCTCGCTGGATGTATTTGTGCAGGTGAATACTTCCGGTGAGGCCAGCAAATACGGCCTG
TCTCCTGAAGATGTACCGGCTTTTATTCAGGCGCTTCCCGCATTCTCTGCGCTACGTGTGCGCGGGTTGATGACGCTAGC
GCTGTTTTCCAGCGACGCTGAACGCGTGCGCCAGTGTTTTATACGGCTGCGTCAGTTACGCGATCGGCTGCAGCAAAACC
TTCCGGTCGGCATTGCGCTGGATGAATTATCCATGGGGATGTCCGGCGATTTTGAAATAGCCATTGAGGAAGGTGCCACC
GTGGTACGCGTCGGGCAGGCAATCTTTGGTGCGCGCCCTTTGCCGGATAGCTACTACTGGCCTGACGAACCTCTCACAGA
ATCACACGATTAA

Protein sequence :
MSISSDTQTRHDRHGCYPDAVTVDDFQLNLAAVQARIAAACQRVGRDPATVRLLPVSKTKPENRLRMAHAAGCRILGENK
VQEAFRKWEAMQDLTDLQWSVIGHLQTNKVKLVARFASEFQALDSLRLAEALDRRLQIEGRSLDVFVQVNTSGEASKYGL
SPEDVPAFIQALPAFSALRVRGLMTLALFSSDAERVRQCFIRLRQLRDRLQQNLPVGIALDELSMGMSGDFEIAIEEGAT
VVRVGQAIFGARPLPDSYYWPDEPLTESHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 54
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-37 54
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 54
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 54