Gene Information

Name : PCC21_036890 (PCC21_036890)
Accession : YP_006648345.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4196318 - 4198312 bp
Length : 1995 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTCTCGTAAAGAACTTGCCAATGCTATCCGCGCGCTGAGCATGGATGGGGTGCAGAAAGCCAAATCCGGTCACCC
GGGCGCACCGATGGGCATGGCCGATATCGCTGAAGTGCTGTGGCGCGATTATCTTAACCATAATCCGGCCAACCCTAACT
GGGCCAACCGTGACCGCTTCGTGCTGTCCAACGGCCATGCATCCATGCTGATTTACAGCCTGCTCCATCTCTCCGGCTAC
GACCTGCCGATTGAGGAACTGAAAAACTTCCGTCAACTGCATTCCAAAACGCCAGGCCACCCGGAATACGGCTACACCGC
CGGTGTGGAAACCACCACCGGCCCGCTGGGGCAAGGGATTGCCAACGCCGTAGGTATGGCGATTGCCGAGCGCACGCTGG
CCGCGCAGTTCAACCGCCCGGGTCATGAGATTGTCGACCACCACACCTACGCGTTCCTGGGCGACGGCTGCATGATGGAA
GGGATTTCTCACGAAGTCTGCTCGCTGGCCGGCACCATGAAGCTCGGCAAACTGACTGCGTTTTATGATGACAACGGCAT
CTCTATCGATGGTCACGTTGAAGGCTGGTTTACCGACGATACTGCCGCCCGCTTTGAAGCCTACGGCTGGCACGTGGTGC
GCGGCGTAGACGGTCACGATGCGGACGCTATCAAACGCGCTATCGGTGAAGCCCAACTGGTGACCGACAAGCCGTCGCTG
CTGATGTGCAAAACCGTGATTGGCTTCGGCTCACCGAACAAGGCCGGTACGCACGACTCCCACGGTGCACCGCTGGGCGA
TGCAGAAGTGGCAGCGTCCCGCGAACAGCTGGGCTGGGCGCACGCGCCGTTTGAGATCCCGGCTGATATCTATGCCGCCT
GGGATGCGAAACCGGCCGGTCAGCGTAAGGAAGCGACCTGGGATGAGGCGTTTGCCGCCTACGCCAGCGCGTACCCTGAG
CTGGCTGCCGAGTTCAAACGCCGCACCGGCGGTGAACTGCCGGCCAACTGGCAGGCGGACGCACAGAAATTTATCGACGA
TTTGCAGGCCAATCCGGCGAAAATCGCCAGCCGCAAAGCGTCACAGAACGCGCTGGAAGCCTACGGCAAACTGCTGCCGG
AATTCCTGGGCGGCTCTGCCGACCTGGCACCGAGCAACCTGACCATCTGGTCCGGCTCGGTATCGCTGGATAAAGACCAC
GCGGGTAACTATATCCACTACGGCGTGCGCGAATTCGGTATGACGGCCATTGCCAACGGGATTGCGCTGCACGGTGGCTT
TGTGCCGTACACGGCGACCTTCCTGATGTTCGTGGAATACGCGCGTAACGCCGTGCGTATGGCCGCGCTGATGAAAATCC
GCAGCATCTACGTTTACACCCACGACTCCATCGGTCTGGGCGAAGACGGCCCGACCCACCAGCCGGTTGAACAGCTGGCC
AGCCTGCGTGTGACGCCGAACATGAGCAACTGGCGTCCGGCAGATCAGGTGGAAACGGCGGTGGCGTGGAAATACGCCAT
TGAGCGTCAGGACGGCCCGACGTCGCTGATCCTGTCCCGTCAGAACCTGGCACAGCAGTCACGTACGGCTGAGCAGCTGG
CGAACGTGGCGAAAGGTGGCTATGTGCTGAAAGACAGCGAGGGTCAACCTGAGCTGATCCTGATTGCCACCGGTTCTGAA
GTTGAACTGGCTGTCGGCGCGTATGACAAACTGACTGCAGCAGGCCGCAAGGTGCGCGTGGTGTCCATGCCGTCTACGGA
TGCGTTCGACAAGCAGGATGCAGCTTACCGTGAAGCGGTGCTGCCGAAAGCGGTATCGGCACGTGTAGCGATTGAAGCGG
GTATTGCGGACTACTGGTTCAAGTACGTCGGCCTGAACGGCGCGATTGTCGGCATGACGAGCTTCGGTGAATCTGCGCCG
GCTGAGCTGCTGTTCGAAGAATTCGGCTTCACCGTCGATAACGTCGTTGAAAAAGCGCAGGCGCTGCTGAAGTAA

Protein sequence :
MSSRKELANAIRALSMDGVQKAKSGHPGAPMGMADIAEVLWRDYLNHNPANPNWANRDRFVLSNGHASMLIYSLLHLSGY
DLPIEELKNFRQLHSKTPGHPEYGYTAGVETTTGPLGQGIANAVGMAIAERTLAAQFNRPGHEIVDHHTYAFLGDGCMME
GISHEVCSLAGTMKLGKLTAFYDDNGISIDGHVEGWFTDDTAARFEAYGWHVVRGVDGHDADAIKRAIGEAQLVTDKPSL
LMCKTVIGFGSPNKAGTHDSHGAPLGDAEVAASREQLGWAHAPFEIPADIYAAWDAKPAGQRKEATWDEAFAAYASAYPE
LAAEFKRRTGGELPANWQADAQKFIDDLQANPAKIASRKASQNALEAYGKLLPEFLGGSADLAPSNLTIWSGSVSLDKDH
AGNYIHYGVREFGMTAIANGIALHGGFVPYTATFLMFVEYARNAVRMAALMKIRSIYVYTHDSIGLGEDGPTHQPVEQLA
SLRVTPNMSNWRPADQVETAVAWKYAIERQDGPTSLILSRQNLAQQSRTAEQLANVAKGGYVLKDSEGQPELILIATGSE
VELAVGAYDKLTAAGRKVRVVSMPSTDAFDKQDAAYREAVLPKAVSARVAIEAGIADYWFKYVGLNGAIVGMTSFGESAP
AELLFEEFGFTVDNVVEKAQALLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 83
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 69