|
Name : PCC21_035370 (PCC21_035370) Accession : YP_006648193.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : LacI family transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 4020139 - 4021329 bp Length : 1191 bp Strand : - Note : - DNA sequence : ATGCGTAAGCGTCGTAGTACCGGTAAGGTTACGCTACAGGATGTCGCCGACTACGCGGGCGTAGGGACGATGACGGTATC GCGCGTGATGCGCAAACCCGATCTGGTCTCTGAAAAGTTACGCAGCAAAGTGGAACTGGCCGCCAGAGCATTAGGTTATG AACCCAATCAAGAGGCCAGCCAGCTCACCGAGAGTACGAGTCGCGTGACGCTACAGGACATTGCGAGCCATGCTGGTGTC GGCGCGATGACGGTGTCCCGCGCGTTGCGGGAACCCGGTCTGGTCTCCGATGCCACACAGAAGAAAATCAATGACGCGAT AAAAACGCTGGGCTATGTTCCGAATCAGGCAGCAGGCGCGCTGGCATCAGCCTATCAGCCTGCTATCGCGGTGCTTTATC CTTTTCAGCAAGATCGCGCCAGCGTGCGTTTTGTGCAGGCGCTGCAACAGGCGGTGGGCAAACATAACGTTCCGTTAATC ATGGGCTGCCATGAATATCGCCAGCATACCGAAGCGGGAATGGTCGAAAAACTCCTGCAGCAGCGGCCAGCGGCGCTGGT GTTATTCAGCGCGCAACTCTCACAGCGAACCCGAGACATTATTCAGGCCAGCAACGTTATTACGGTGAATGTTTCCGGTG CTGACGTGCTGAGTGCGAATATCAATATTGATATCGCCCTGGCCGAAGCGGCGGAACAACTGACGATGTCGCTGTTAGAA AAGGGATATCGTCATGTTGCTTACATCGGTGCGCATACGGATAACCGTTTGCAAAAACAGCAGTTGAACGGCTGGAATAA AGCCATGCTGGCACACTATCACAATGCGGATCTGAAAATTACGATCCCGGAAGCGCCTAGCCTGCAGTTTGGCCGCTATG CGATGACGGAATTGCTGCAAAACCAGCCGGAGCTGGATGCGATTATCTGCAGCCATGAAGAAATTGCGCTGGGGGCGCTC TTTGAATGCCAGCGCCGCCTGATGAAAGTCCCTTACGATCTGGCGATTACCTGTCTGGATGGTTCTGAACAATGTGAACA TACGTTCCCGGCGCTGACCGCGATGCGGCTTGATTATGAAAAGCTGGGCGCGGAGGTCGGGCGTCTGGTACTCGCCATGA TGGACAACGACGAGCATCCCCCCGTACAGGAAAAAGTGAAATTCATCTTTGAGCCGCGTGCCAGCAGCTAG Protein sequence : MRKRRSTGKVTLQDVADYAGVGTMTVSRVMRKPDLVSEKLRSKVELAARALGYEPNQEASQLTESTSRVTLQDIASHAGV GAMTVSRALREPGLVSDATQKKINDAIKTLGYVPNQAAGALASAYQPAIAVLYPFQQDRASVRFVQALQQAVGKHNVPLI MGCHEYRQHTEAGMVEKLLQQRPAALVLFSAQLSQRTRDIIQASNVITVNVSGADVLSANINIDIALAEAAEQLTMSLLE KGYRHVAYIGAHTDNRLQKQQLNGWNKAMLAHYHNADLKITIPEAPSLQFGRYAMTELLQNQPELDAIICSHEEIALGAL FECQRRLMKVPYDLAITCLDGSEQCEHTFPALTAMRLDYEKLGAEVGRLVLAMMDNDEHPPVQEKVKFIFEPRASS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vpeR | ADD91728.1 | putative transcriptional regulatory protein VpeR | Virulence | PAI-I AL862 | Protein | 2e-93 | 54 |
| unnamed | CAC39290.1 | hypothetical protein | Not tested | LPA | Protein | 5e-94 | 53 |
