Gene Information

Name : PCC21_035240 (PCC21_035240)
Accession : YP_006648180.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4007357 - 4008085 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCGGTGGTGTTGCCATGATTGCCCTGCAAGAACTGGCCTTTGGCTATCGTAATCAACCACCGCTCGCGACGCTCAG
CGGGTGCTTTCATCAAGGCTCGCTGACAGCAATTATCGGCGCAAACGGCACGGGCAAATCCACGCTGCTGAAAACGCTGG
CGGGTCTGTTGCCGCCACTATCCGGCTCATTCAGCCTCGGTAGGGGTTGTGAAGATAGCGCTATCGGCTATTTGCCTCAG
CTCTCCGAATTTGATCGGCAGTTTCCTATCAACGTACGCGATCTGGTGCTCATGGGGTCGCTGCCCCATCGCGGATTACT
ACGAAGTATCAATACCAACTGGCATCGTAAAGCAGCAGACGCGCTCGACGCCGTCTCAATGGCAGACTTTGCCGATCGGC
ATATTGGCGTCCTGTCCGGTGGGCAGCTACAGCGTGTGCTCTTCGCACGGCTGATGCTGACTCAGGCTCCCATCATTCTG
CTGGATGAGCCTTTTACCGGCGTCGATAGCCACACCACGCAGGCGCTTTTGCAGATTATTGAGCAGCTTCACGCAGAAGG
CAGGACTATTCTGGCCGTGTTGCACGATCTGGAGCTGGTCGGTCAGCACTTCCCGAATATCTTGCATCTCACCCCAGACG
GCCCTCACTGGGGAGAGGCTCAGCCCATCTTACATAGCCTGCGCAAGGCAGACAGCGATACGCCAACGCTCAGGATCGTC
ACGTCATGA

Protein sequence : 
MGGGVAMIALQELAFGYRNQPPLATLSGCFHQGSLTAIIGANGTGKSTLLKTLAGLLPPLSGSFSLGRGCEDSAIGYLPQ
LSEFDRQFPINVRDLVLMGSLPHRGLLRSINTNWHRKAADALDAVSMADFADRHIGVLSGGQLQRVLFARLMLTQAPIIL
LDEPFTGVDSHTTQALLQIIEQLHAEGRTILAVLHDLELVGQHFPNILHLTPDGPHWGEAQPILHSLRKADSDTPTLRIV
TS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 6e-58 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_035240 YP_006648180.1 ABC transporter ATP-binding protein BAC0400 Protein 5e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_035240 YP_006648180.1 ABC transporter ATP-binding protein VFG1496 Protein 3e-58 61