Gene Information

Name : PCC21_033110 (PCC21_033110)
Accession : YP_006647967.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3757356 - 3758099 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGCTCATCACCATTAATCAGGTTCAAAAATATTACGGCCAGAACCATGTCCTGAAAGGCGTGGATCTGGATATTGA
AATGGGTGAGGTCATTTCGATCATCGGGCGCAGCGGCTCTGGTAAGAGCACGCTATTGCGCTGCATGAACGGTCTGGAAG
GCTATCAGGACGGCAGCATCAAGCTGGGCGGGATGACAGTTACCGACAGGGATTCGCAGGCGCGGGAAATCAGCCGCTCG
GTCGGCATGGTGTTCCAGAACTTCAATCTGTTTCCGCACATGACGGCGCTGGAAAACGTGATGCTGGCACCGCGCCGCGT
GCTGGGTAAAAGTGCGGCGGAGTGCCGTGAGCTAGGCGAACGGGTGTTGAAAAAGGTGGGGTTGGGTGAGCGCCTTCACT
ATTACCCTGCCAACCTGTCGGGCGGCCAGCAGCAGCGCGTCGCGATTGCCCGCGCGCTGGCGATGAACCCGAAAGTCCTG
CTGTGCGATGAAATTACCTCGGCGCTCGATCCTGAGTTAGTCGGCGAAGTACTGAAGGTGCTGGAACAGCTGGCCGCAGA
AGGTATGACGCTGATTCTGGTGACGCATGAAATGAATTTTGCCCGTGAAGTGGGCGACCGCGTGGTGTTTATGCATCAGG
GCACGGTCTGGGAGCAGGGCGACAGCAAAACGCTGTTCGCTAACCCGCAGACCCGCGAACTGAAACAGTTCATCGCCTCG
GTCCGGGGACTATCGGAAGCGTAA

Protein sequence : 
MPLITINQVQKYYGQNHVLKGVDLDIEMGEVISIIGRSGSGKSTLLRCMNGLEGYQDGSIKLGGMTVTDRDSQAREISRS
VGMVFQNFNLFPHMTALENVMLAPRRVLGKSAAECRELGERVLKKVGLGERLHYYPANLSGGQQQRVAIARALAMNPKVL
LCDEITSALDPELVGEVLKVLEQLAAEGMTLILVTHEMNFAREVGDRVVFMHQGTVWEQGDSKTLFANPQTRELKQFIAS
VRGLSEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_033110 YP_006647967.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-29 44
PCC21_033110 YP_006647967.1 amino acid ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-22 41