Gene Information

Name : PCC21_032420 (PCC21_032420)
Accession : YP_006647898.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3670574 - 3671077 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAAAGGAACTGATGGTGCATCTGTCGCACCAAAGGAACGTATTAATATCAAATATGTTCCGGCCACTGGTGGTCA
GCAGGCGGAAATAGAATTGCCGTTGACGCTGATGATCGTGGGAAATATGAAAGGGCGCACAGAGGAAACGCCGATCGAAG
AACGTCAGACCGTATCGATCGATAAGAACAACTTTACCTCAGTGATGAAAGAAGCAAATCTGGAATTGAATTTCAGTGTG
CCAAACCGCCTTGAAGAAGAAAGCCAGGACGAGCTGCCAGTGAAACTGAGCATCGGCGGTCTGAATGATTTCTCCCCTGA
CCGCATTGCCCAACAGGTGCCTGAATTACGTAAGTTGCTTGATTTACGTGAAGCACTGGTGGCGCTGAAAGGCCCCCTCG
GCAATATTCCCTCATTCCGTAATCGTTTGCAGGATCTGTTGTCCAGCGAAGAAGCCAGAGAGCAGCTTTTGAAAGAGCTC
GATCTGGTCAAACCCGCCGAATAA

Protein sequence :
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMIVGNMKGRTEETPIEERQTVSIDKNNFTSVMKEANLELNFSV
PNRLEEESQDELPVKLSIGGLNDFSPDRIAQQVPELRKLLDLREALVALKGPLGNIPSFRNRLQDLLSSEEAREQLLKEL
DLVKPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-35 54
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 8e-43 51
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 5e-43 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_032420 YP_006647898.1 hypothetical protein VFG2092 Protein 2e-49 61
PCC21_032420 YP_006647898.1 hypothetical protein VFG2474 Protein 1e-37 49