Gene Information

Name : PCC21_032390 (PCC21_032390)
Accession : YP_006647895.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3666732 - 3668498 bp
Length : 1767 bp
Strand : -
Note : -

DNA sequence :
ATGTCACTGGAACATTTTTTCAGGGATGAGCTGACCTACTTGCGCCTGCAAGGGCGTGAATTCGCCAAGGCGCACCCTGA
GCTTACCCGATTTTTGTCAGAACAAACCACGGATCCAGACGTCGAGCGTCTGCTGGAAGGGTTCGCCTTTTTGACAGGGA
GCCTGCGGGCGAAGATCGAGGATGAATTTCCGGAACTGACACACGGTCTGCTGGGCATGCTGTGGCCTAATTACCTGCGC
CCCGTACCGAGCATGACGATTATGCAGTTTTCGGTACTCCCCGGCGCGATTGCCCAGCCCGCGTTTGTTGAACGCGGCTG
TGAGCTTGATAGTCTGCCGATTGATGATGTGGTGTGCCATTTTCAGACCTGCCACGACGCCTGGATTTATCCAGCGGATA
TCCGTGAGATCAAGGTACAGAGCGGTAACGATCTTTCCACCATCACGCTGGATATTGGGCTGCATGGCCCGCTATCGTTA
AGCGATCTACAACTCGACAAGCTGCGCTTTTATCTGGGCGGTGATACCTATACGGCCTACGAACTCTATTTCTGGATTGC
CAGCCAACTGTCGCACATTGAGCTGGAAGTCGATGGTCAGCGCTTCCGTCAGGAAGCCAGCGTGCTGAAAACGGTCGGCT
TTGAGCGGGAAGATGCGCTATTGCCGTATCCCGGTAACGTCTATTCTGGCTACCGCATTCTGCAGGAATACTTTTGTTTT
CCTGAAAGTTTCCTCTTTTTCCAACTCGCGGGCGCGGTATGGCCGGAGCTTCCGCTGACGGTAACGGAATTCCGTCTGCA
TTTTTGCTTTGACCGCCCGCTGCCGGCGGAACTGAAGATCCGCCCTGATTCGTTCATGCTCAACTGCGTGCCGGCAATCA
ATCTCTTCCAGCATGATAGCGAGCCGATCAACCTCAGCGGACGCCAGACGGATTACCCGCTGAAAGCCAGCTACCGCAAC
GCCGATAGCTTTGAAATCTTCTCTGTGGATAAGGTTGAAGGCTGGGTTGAAGGGAATTCAGGTCGTGCTCGGGGGATTCC
ACGCACCTATCAGCCGTTTGAGAGCTTTCAGCACCAAATCGAACGTGCCAAAGGACGGCTCGCGCTCTATTACCGTATTC
GGGTAAGGGAAGCGGTGAACGGCAACGGGTTTGATCACATGCTCTCTTTTGTGCGTGGTGATGAGCAGGAAGTGATTGAT
TTAGATGAATCCATCTCGGTCACGCTGACTTGTACCAACCGATCGCGTGCGGCGAAACTGCCTGTTGGGTCGATCTGCGT
GCCAACCGGCAATTCGCCGTCTTTCGCGACGTTTCGCAATCTGGTACGGCCGACGCGACCGCTGCGGCCTGCCATGGATG
GCAGCCTGCACTGGACGCTGATCTCCAACCTGTCTCTGAACTATGTGTCGCTGCTGCGGCGCGATGCGCTGGTGCAAATT
CTGCGTACTTATGATTTCCCTGCACTGCACGACAAGCAGGCGGAACAAGCCTCGCGTAAGCGTCTGGCAGGGATCGAATC
TATCGAAACCACGCCTATCGATCGTCTGGTGCAGGGGATGCCGGTTCGCGGCTTGAAATCCATCCTGTCAGTACGGCAAT
CCGCGTTTTCCAGTGAAGGAGAACTCTATCTGTTTAGTACGGTGCTGGCGCACTTCTTCTCGCTATACGCCAGCGTCAAC
GCTTTCCACCTGTTGGAAGTGGTCAACATCGATAACAAGGAGCGCTACCGATGGCCGGTACAGATAGGTCAACACTCAAT
GATGTGA

Protein sequence :
MSLEHFFRDELTYLRLQGREFAKAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIEDEFPELTHGLLGMLWPNYLR
PVPSMTIMQFSVLPGAIAQPAFVERGCELDSLPIDDVVCHFQTCHDAWIYPADIREIKVQSGNDLSTITLDIGLHGPLSL
SDLQLDKLRFYLGGDTYTAYELYFWIASQLSHIELEVDGQRFRQEASVLKTVGFEREDALLPYPGNVYSGYRILQEYFCF
PESFLFFQLAGAVWPELPLTVTEFRLHFCFDRPLPAELKIRPDSFMLNCVPAINLFQHDSEPINLSGRQTDYPLKASYRN
ADSFEIFSVDKVEGWVEGNSGRARGIPRTYQPFESFQHQIERAKGRLALYYRIRVREAVNGNGFDHMLSFVRGDEQEVID
LDESISVTLTCTNRSRAAKLPVGSICVPTGNSPSFATFRNLVRPTRPLRPAMDGSLHWTLISNLSLNYVSLLRRDALVQI
LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLVQGMPVRGLKSILSVRQSAFSSEGELYLFSTVLAHFFSLYASVN
AFHLLEVVNIDNKERYRWPVQIGQHSMM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1761 YP_851424.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-129 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_032390 YP_006647895.1 hypothetical protein VFG2078 Protein 2e-158 52