Gene Information

Name : PCC21_032360 (PCC21_032360)
Accession : YP_006647892.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3664026 - 3664547 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCGGGCTCTGTGCTTATGTTCCCTGATGTTCCTGCTGTCGGGGTGTACCACGCTGGGCAAGATGGCGCAGGTGGC
GGCGAATCCCGACATTCAGGTAGGCAGTAATAATCATCAGCCTTCTACCGTGGGGTTTAGCTTGCTGGCGGAACCGGACG
TTAACCCGAATGACAGCGGTGAAGCCGCACCTATCGAATTCCAACTGGTGCTGTTGGCGGAGGATTCGCGTCTGTTAGCC
ACCGATTACGACCAAATCACGACGGATATCGAAAAGGCATTAGCGAAGAATTACATCAATCATCAGGACTACACGCTGCT
GCCGGGGCAGTTCAAGTATCTGCCGCCCGAAGCGCTGGATGAAAAAGTGCACTACCTCGGCGTTGTGGCGCGCTATGCGG
ATTCGGAAAGCGCAGAGTGGCGCAAAGTCATCAAGCTAAAGAATACCGGGCAGACGTATCAGATCCTCGTGCACCTGCGC
AGGGATGAAGTCGAAATCAAAAAAGACCAAGAAGAAGAATAA

Protein sequence :
MLRALCLCSLMFLLSGCTTLGKMAQVAANPDIQVGSNNHQPSTVGFSLLAEPDVNPNDSGEAAPIEFQLVLLAEDSRLLA
TDYDQITTDIEKALAKNYINHQDYTLLPGQFKYLPPEALDEKVHYLGVVARYADSESAEWRKVIKLKNTGQTYQILVHLR
RDEVEIKKDQEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec24 YP_851421.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-35 47
aec24 AAQ96718.1 Aec24 Not tested AGI-1 Protein 1e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_032360 YP_006647892.1 lipoprotein VFG2081 Protein 4e-26 42