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Name : PCC21_032290 (PCC21_032290) Accession : YP_006647885.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Unknown Product : IcmF-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 3652224 - 3655721 bp Length : 3498 bp Strand : - Note : - DNA sequence : ATGTTTAAAACAATCATAACCTTTCTACGCAAGCAGTTACCTAAACTGAAACTCTCCTGGTTACTTTTGGGCGTGCTGCT GTGGGTCGTCGTGTTGGTTCTGGCCTGGTGGCTGGGGCCGCGTTTGACGGTGGGCGAGTCGCGTCCGTTGCAGGGAATCT GGGGCCGCGTGGTGTTCACGCTGGTTTGGCTGTGGCTGGCGTTTTCCTACAGCGCCTGGCTGGTCTGGCGTCGCGTGCAG CAGATGCGGGCGGAGCGTCATGAGCAGCAGGTGATTGAACAGGATCCCTTGCAGGTGTATGTCGACAGCCAGCAAACGTT TCTCGACCGCTGGCTGGAGGCGTTTCAGACCCAGTTGGGTAAACGCGCGCTGTACGCGATGCCCTGGTATCTGACGATTG GTCTGGCTGGCAGCGGGAAAAGTAGCCTGATCCATCGCGCTAATCCGGCAAACAAAATGAATCCGAAGCTGGATGCGGAG CTGCGAGACGTGGCGGCAGGCCAGCAGGTGAGCAGTTGGGTCGGCGAATCCGCGGTGATTTGGGACCCAAGCGGACAGCT ACTTGCCCAGCCTGAGCTGGAAGGCGATTCGCTCGGACAACGTCATGCTCGACTGTGGCAGCACCTGTTGCAGTGGCTCA GTGAAAACCGCCGCCGCCAGCCGCTCAACGGTCTGGTGCTCACGCTGGATATCTCCTGGCTGGCGCAGGCTGGCGTCGCC GATCGCAAAGCTTACGCGCAGGTGATGCGCGCCCGCATGCAGGAGATTTCCGTCAACATCAATACGCGCTTACCGGTATA TATCGCGCTGACCCGGCTGGATATGCTGAGTGGCTTCGATAAGGTCTATCGCCAGTTGAACCGCGAGGCGCGTCAGGCCG TATTAGGGGTGACGTTTACGCCGCAGGCGAGCAACAGCAAAGGCTGGTTAGAAGAGCTGGAGCGCTTCTGGGACGAGTGG GTCACGCACCTGAATGACAACCTGCCGGATATGCTGCTGACGCAATCCGACAGAAGCGTGCGCAATTCGCTGTTCTCGTT CGTTCGCCAACTGGCTGGGGTGAAAGATTATGTGATGGAAGTGCTGACGGAAACGTTAGCGACGGGCGAGGATCGCGCGT TCCTGATCCGCGGCGTCTACGTCAGTTCTGTCTACCAACAAGGGGTGCCGTTCGATGCCTTTGCGCAATCGGCTTCCCGC CGCTATCAACTGCCAGAGCCGATTAACCCTGCGCTGCGCGGTGAATCCAATACGTTCTTTGTGCAACGTCTCTTCCCTGA CGTCATTTTCCCTGAGGCCAGTCTGGCGGGGGAAAACCGGCTGCATAGCCTCTATCGTCGGCGTCGGCTGAGTATCGGCG TGGGCTGCATGTTGCTCGCCAGTCTGGCGCTGATTGGCAGCTGGCACCATTTCTATCGGGTCAATGAAGAGGCGGGACGT AACGTCCTGACAAAAGCACAGGCCTTTATCGGCACCAATGAGCTGGAAGGCCAGCAGGGTTACGGCTATCAGCAGTTGCC GCGTCTGAATTTGATTCGCGATGCGACCTTATCCTTTGGTAATTACCACGAGCGCACGCCGCTGCTGGCCGATCTTGGTC TGTATCAGGGCGACAAGATTGGCCCTCATGTTGAAGGCACCTATCTGCAAATGCTGAATCAGCGCTTTCTCCCGGCGGTG ATGCAAGGGCTTCTGGAAGATCTGAATCAGGCACCGGCCAATAGTGAGCAAAAACTGACGATTCTGCGCGTGATGCGGAT GCTGGATGATGCGTCAGGGCGCAATAAAGCGCTGGTCGAACAGTTTATGGCGCAGCGCTGGCAGAAGGCATTTCCCGGAC AGGGCAACGTGCAGGAACAGCTGATGCAGCATCTGGATTATGCCCTTGAGCACACCGACTGGCACAAGGCTCGTGAGCAG AAAGACGCGGTAGCGATCAGCACGTTCGCGCCATTTAATGGACCGATTACGCTGGCCCAGCAGGAACTGAGCAAGCTGCC GATGTATCAGCGCGTTTACCAGAGTCTGGTGATGAAGGCGACACAGGTGCTGCCGCCGGATTTAGCGATTCGTGACGAAG TCGGGCCGACCTTTGACCCGGTGTTTTCTCTGCGTAATGACAAAGCGGGAAGTGTGCCTCGGCTGCTGACGTATCCCGGC TTTAGTGATTATTACCTCAAGCAGGACAAAGCGCTGTTAGAGCTGACGGCACTGGACGCCTGGGTGCTGGGACAGCGTGA GCGTGCGCAGTTCAGCGAGGCCGATCGGCGGGAAATTCTGCGCCAGGTGAATGACCGCTACATTACGGATTACATCAACC AGTGGCAGAAAGTGCTGGCGAACATTGATGTGCAGACGCTCGATACGCCGGAGCAGGCGCTCGACATTCTCACGGATATT ACTGGCAACGATCAGCCTTTTCAGCGCGTGCTGACTACGGTCAGTGACAACACCCGTATCCGTAAGCTATCCGATGATGA TAACGACACGGCGCAGAGTATTAACACGCGTACTGGTCGTCCGTTTATGACCATCAATGCGGCGCTGAGCGGACGCGGTG AGCAGGGGCCGCTGGTGCAAGAGGTCAATCAGAAGCTGACCGATCTCTATCACTATCTCGATCAGATCGTTAACGCAACC GATCCGGGACAGGCGGCGTTGAAAGCGGTGCAGGCGCGGCAGGGAAATAAATTTGCCGATCCGGTATTCGCCTTACAGCA ATACGCCCGCAGCCTTCCCGCGCCGCTGGATCGCTGGGTAGGACAATTAGCCGGAGAGAGCGCGAGTCTGGTGACCGGGC TGGCGATGTCGTCGCTGAATCAGGAATGGCTGGATAAGGTCGTCACGCCATTCAATGAGAAGCTGGCAGATCGTTATCCC TTCGACCCGTCATCGAACAAGGATGTGCCGCTATCGGAAATGGAAATGTTCTTCATGACTGGCGGGACGCTGGACAGCTT CTATCAAACCAACCTCAAGGCGATGATGGAGAGCGGCATGCTGGAAGAAGGCATGGCATCGCCTCTGCAGGCTGAGCTGG TGAAACAGCTTGAACGCGCTACCCGCATCCGCCAGACCCTGTTTAATGCACAGGGCAGCCTGGAAGTGCATTTCGTTCTG GAGCCGCTGGAACTGACGGCGAACAAGCGCCGCAGCGTGCTGAATCTGGACGGACAACTGCTGGAATACAGCCACGGTCG TCGCCAGAAAACGCCGCTGGTGTGGCCAAACAGTATGCGCGACGGGGCTGAGAGCAAGCTGACACTGGTGCCGGACGATC GTGAGCGTTCTCCGCGTAGCCTGAGCTTTAGCGGACCGTGGGCGATGTTCCGCTTAATCAATAGCGATCAGCTGACTCAG GTGAATGAGAACACCTTCGACGTGCGCTTCTCGCTGGAGAACGGGGCGATGACCTATCGCGTGTATACCGATGCCAGCCA TAACCCGTTTGCCGGTGGTCTGTTCAGCCAGTTCACGCTGCCTGACTCGCTTTATTAA Protein sequence : MFKTIITFLRKQLPKLKLSWLLLGVLLWVVVLVLAWWLGPRLTVGESRPLQGIWGRVVFTLVWLWLAFSYSAWLVWRRVQ QMRAERHEQQVIEQDPLQVYVDSQQTFLDRWLEAFQTQLGKRALYAMPWYLTIGLAGSGKSSLIHRANPANKMNPKLDAE LRDVAAGQQVSSWVGESAVIWDPSGQLLAQPELEGDSLGQRHARLWQHLLQWLSENRRRQPLNGLVLTLDISWLAQAGVA DRKAYAQVMRARMQEISVNINTRLPVYIALTRLDMLSGFDKVYRQLNREARQAVLGVTFTPQASNSKGWLEELERFWDEW VTHLNDNLPDMLLTQSDRSVRNSLFSFVRQLAGVKDYVMEVLTETLATGEDRAFLIRGVYVSSVYQQGVPFDAFAQSASR RYQLPEPINPALRGESNTFFVQRLFPDVIFPEASLAGENRLHSLYRRRRLSIGVGCMLLASLALIGSWHHFYRVNEEAGR NVLTKAQAFIGTNELEGQQGYGYQQLPRLNLIRDATLSFGNYHERTPLLADLGLYQGDKIGPHVEGTYLQMLNQRFLPAV MQGLLEDLNQAPANSEQKLTILRVMRMLDDASGRNKALVEQFMAQRWQKAFPGQGNVQEQLMQHLDYALEHTDWHKAREQ KDAVAISTFAPFNGPITLAQQELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDPVFSLRNDKAGSVPRLLTYPG FSDYYLKQDKALLELTALDAWVLGQRERAQFSEADRREILRQVNDRYITDYINQWQKVLANIDVQTLDTPEQALDILTDI TGNDQPFQRVLTTVSDNTRIRKLSDDDNDTAQSINTRTGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNAT DPGQAALKAVQARQGNKFADPVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLADRYP FDPSSNKDVPLSEMEMFFMTGGTLDSFYQTNLKAMMESGMLEEGMASPLQAELVKQLERATRIRQTLFNAQGSLEVHFVL EPLELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFSGPWAMFRLINSDQLTQ VNENTFDVRFSLENGAMTYRVYTDASHNPFAGGLFSQFTLPDSLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 45 |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 45 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 45 |
