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Name : PCC21_031770 (PCC21_031770) Accession : YP_006647833.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3594767 - 3597343 bp Length : 2577 bp Strand : - Note : - DNA sequence : ATGCGTCTGGATCGTCTTACCAACAAATTCCAACTTGCTCTTGCTGATGCCCAGTCTCTCGCCCTTGGGCGCGATCACCA GTTTATTGAACCACTTCACTTGATGAGCGCCTTGCTTCATCAGGATGGTGGAACTGTTGGTCCACTTCTGACTGTTGCCG GAGCCAATCTTAACCACCTGAAAACCGAAATTGACCAGGCAATCACACGTTTGCCGCAGGTTGAAGGTACTGATGGTGAT GTTCAGCCTTCTAGCGAGTTAGTCCGCGTATTGAATATGTGTGACAAGCTGGCGCAAAAGCGTGGCGATACCTTTATCTC TTCGGAGCTTTTCGCGCTTGCTGCGCTGGAGTCTCGCGGCACGTTGGGGGATATATTGAAAAAGGCGGGGGTTACGCAGC AAGGTGTAACAAACGCGATTGAACGAGTGAGAGGAGGGGATCAAGTGAACGATCAGGGTGCTGAAGATCAGCGCCAGGCA TTGAAAAAATTCACGATTGATCTTACGGAGCGTGCGGAACAAGGCAAACTCGATCCTGTGATCGGGCGTGATGAGGAAAT TCGCCGCACTATTCAGGTTTTGCAACGTCGAACCAAAAATAACCCGGTGTTAATCGGTGAACCCGGCGTGGGTAAAACCG CGATAGTAGAAGGGTTAGCCCAGCGTATCGTTAATGGTGAAGTGCCCGAAGGCTTGAAAAACAAGCGCGTACTTTCACTG GACATGGGCGCGCTGGTGGCGGGTGCGAAATACCGTGGTGAGTTTGAAGAGCGTTTGAAAGGCGTGCTCAACGACCTGTC TAAACAGGAAGGCAACGTCATTCTGTTTATTGATGAACTTCATACGATGGTGGGGGCAGGCAAAGCTGATGGCGCGATGG ATGCCGGTAATATGCTAAAACCTGCGCTGGCTCGTGGTGAGTTGCATTGCGTCGGGGCGACAACGCTCGATGAGTATCGG CAATATATTGAAAAAGACGCGGCCCTTGAGCGTCGTTTCCAGAAAGTGTTTGTCGCTGAACCTACTGTTGAAGACACGAT TGCTATTCTGCGCGGGCTGAAAGAGCGTTATGAATTGCACCATCATGTACAAATTACTGACCCGGCGATTGTTGCGGCGG CCATGCTATCTAACCGCTATATCGCAGATCGTCAACTCCCGGATAAAGCGATTGACCTGATTGATGAAGCGGCATCCAGT ATTCGTATTCAGATTGATTCGAAACCAGAGCCCCTTGATCGGCTTGAGCGTCGAATCATCCAGTTAAAACTGGAACAGCA GGCGCTGAAAAAAGAATCTGATGAAGCCAGCCAAAAGCGGCTTGAATTGCTGAGTGCGGAACTTGACCAAAAAGAGCGTG AATATTCCCAACAAGAGGAAGAGTGGAAAGCAGAAAAAGCGTCACTCACGGGAACACAGAATATTAAAGCGTCTTTAGAG CAGGCGAAAATTGCGCTGGAACAGGCTCGTCGTCAGGGCGATCTGGGGAGAATGTCTGAGCTGCAATATGGCAAAATCCC TGAGCTAGAGAAACAGTTGGCAGCAGCAACGCAGCAGGAAGGGAAAACGATGCATTTGCTGCGTAATCGAGTAACGGATG TTGAAATCGCGGATGTGCTGGCGCGTTGGACTGGGATTCCTGTTTCTCGCATGTTGGAAAGTGAGAAAGAAAAATTATTA CGCATGGAAGATGAACTGCATCAGCGTGTGATTGGGCAGAACGAAGCCGTTGAAGCGGTAGCAAATTCTATCCGCCGTAG CAGGGCTGGGCTATCAGACCCGAATCGCCCTATTGGCTCGTTCCTGTTCCTTGGGCCAACAGGTGTTGGGAAAACGGAAC TTTGCAAAACGCTGGCGACTTTCCTCTTTGACAGCGACGACGCCATGGTGCGTATCGATATGTCTGAGTTTATGGAGAAA CACTCGGTTTCACGTTTGGTCGGTGCGCCTCCGGGATATGTCGGTTACGAGGAGGGGGGATATTTGACGGAAGCGGTACG TCGTCGTCCTTATTCGGTCATTTTGCTAGATGAGATCGAAAAGGCACATCCTGATGTGTTTAATATCCTGCTTCAGGTAT TAGATGATGGGCGTCTTACTGATGGTCAGGGCAGAACGGTCGACTTCCGTAATACTGTGGTCATCATGACGTCCAATCTG GGATCCGACCTTATTCAGGAGCGTTTTGGTGAACGCAGCTATACCGAAATGAGAGATATGGTGCTTGAAGTTGTTAGCCA CAGCTTCCGCCCCGAGTTTATTAACCGTATCGATGAGGTTGTGGTATTCCACCCATTGGGAAGGGCGCATATTACGTCGA TCGCACAAATTCAGCTTCAGAGACTGTACAAGCGTCTTGAAGAGCGTGGATATAGTGTCACGATCACGGATGCAGCTTTA GATGTGCTTGGGGAAGTCGGGTTTGATCCTGTCTACGGTGCTCGTCCGCTTAAAAGAGCGATACAGCAACTGATAGAGAA CCCACTCGCTCAGCAGATGCTGGGGGGGAAATTGATACCTGGTAAACCGATCACATTAGATGTCGATGGTGAGCAGATAG TCGCTCGGCAAGAATAA Protein sequence : MRLDRLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLHQDGGTVGPLLTVAGANLNHLKTEIDQAITRLPQVEGTDGD VQPSSELVRVLNMCDKLAQKRGDTFISSELFALAALESRGTLGDILKKAGVTQQGVTNAIERVRGGDQVNDQGAEDQRQA LKKFTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNRYIADRQLPDKAIDLIDEAASS IRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKRLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLE QAKIALEQARRQGDLGRMSELQYGKIPELEKQLAAATQQEGKTMHLLRNRVTDVEIADVLARWTGIPVSRMLESEKEKLL RMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLATFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGERSYTEMRDMVLEVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYSVTITDAAL DVLGEVGFDPVYGARPLKRAIQQLIENPLAQQMLGGKLIPGKPITLDVDGEQIVARQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-158 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_031770 | YP_006647833.1 | endopeptidase Clp ATP-binding subunit ClpB | VFG2076 | Protein | 2e-109 | 44 |
