Gene Information

Name : PCC21_031440 (PCC21_031440)
Accession : YP_006647800.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3555547 - 3556344 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAAATCAAACTGTACTGCCTGATACCACTTTCAGACTGGACGACGTCAGCTTTTCCGTCGCCGGACGCACGCTGCT
ATACCCGCTCTCTATCACGTTCCCCGTCGGGAAAGTCTGTGGTCTGATTGGACACAACGGCTCGGGTAAATCGACGTTGT
TGAAAATTCTAGGTCGTCATCAGCCCGCTAGCGGTGGTACTGCACTGCTGGGCGAACAGGCGATCGGAAGCTGGGACGGC
AAATTGTTCGCTCGTCAGGTGGCTTATTTACCACAGCAGCTTCCCGCTGCCGAAGGGATGACCGTACGTGAGCTGGTTGC
CGTAGGGCGTTACCCGTGGCACGGCGCATTAGGCCGTTTCGGCAGCGCCGATCGGGAAAAGGTCGAGGAAGCCATCACGC
TGGTGGGGTTGAAACCCTTTGCAAACCGTCTGGTGGATAGCCTGTCCGGCGGTGAACGGCAGCGAGCCTGGCTGGCGATG
ACGGTGGCGCAGGATAGCCGCTGCCTGCTGTTGGATGAACCGACCTCCGCGCTGGACATTGCGCATCAGGTTGAGGTTCT
GGCGCTGATTCAGCGCATGAGCCGCGAGCGCGGCATCACCGTGATTGCGGTGTTGCATGACATCAACATGGCTGCGCGCT
ACTGCGATCATCTGGTGGCGTTGCGCGGCGGCAAAATGATTGCGCAGGGTGAGCCTGTCGCGCTGATGCAAGGGGACGTG
CTGGAAAATATCTACGGCATTCCCATGGGCACTTTGCCTCATCCGGCGGGTGGCGCGCCGGTCAGCTTCGTTTGTTAA

Protein sequence : 
MQNQTVLPDTTFRLDDVSFSVAGRTLLYPLSITFPVGKVCGLIGHNGSGKSTLLKILGRHQPASGGTALLGEQAIGSWDG
KLFARQVAYLPQQLPAAEGMTVRELVAVGRYPWHGALGRFGSADREKVEEAITLVGLKPFANRLVDSLSGGERQRAWLAM
TVAQDSRCLLLDEPTSALDIAHQVEVLALIQRMSRERGITVIAVLHDINMAARYCDHLVALRGGKMIAQGEPVALMQGDV
LENIYGIPMGTLPHPAGGAPVSFVC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-43 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-44 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_031440 YP_006647800.1 iron-hydroxamate transporter ATP-binding subunit BAC0164 Protein 6e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_031440 YP_006647800.1 iron-hydroxamate transporter ATP-binding subunit VFG0925 Protein 3e-42 43
PCC21_031440 YP_006647800.1 iron-hydroxamate transporter ATP-binding subunit VFG1042 Protein 5e-44 41